Canis lupus familiaris (dog): 611914
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Entry
611914 CDS
T01007
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
611914 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
611914 (SNRNP40)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
611914 (SNRNP40)
Complex C
U5 SnRNP specific factors
611914 (SNRNP40)
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
eIF2A
Cytochrom_D1
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
611914
NCBI-ProteinID:
XP_854730
Ensembl:
ENSCAFG00000011149
VGNC:
46607
UniProt:
A0A8C0P6H0
A0A8I3N4I8
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All DBs
Position
2:66299527..66339486
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AA seq
358 aa
AA seq
DB search
MIEQQKRKGPELPLVPVKRQRHELLLGAAGSGPGAGQQQTAPGALLQAGPPRCSSLQAPI
MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacagcaaaagcgcaaaggcccggagttgccactggtcccagtcaagcggcag
cggcatgagctgctgttgggagcggcggggtcgggccccggagctgggcagcagcagacg
gcgccgggagctttgctacaagcgggacctccaaggtgttcctcccttcaagcgccaatc
atgcttctctcaggacatgaaggggaagtgtactgctgcaagtttcatcccaatggatcc
accttagcatctgcaggctttgatcgactgatattgttgtggaatgtctatggtgactgt
gataactatgctacattgaaaggacacagtggggctgtgatggagctgcactataacacc
gatggcagtatgctgttctctgcatccacagataaaactgtggcagtgtgggatagtgaa
acaggtgagagggttaaaaggctgaaaggacatacttcctttgtgaattcctgttatccg
gccaggaggggcccccagcttgtctgcactggaagtgatgatggaacagttaagctttgg
gacatccggaagaaagcagccatccagacatttcagaacacctatcaggtgttagctgtg
accttcaatgatacaagtgatcagattatttctggtggaatagataacgatatcaaggtc
tgggacttgcgccaaaacaagctaacctacaccatgagaggccatgcagattcagtgact
ggcctgagtttaagttctgaaggctcttatctcttgtccaatgcaatggacaatacagtg
cgggtctgggatgtccggccatttgctcctaaagagaggtgtgtgaagatatttcaagga
aatgtgcacaactttgagaagaatcttctgagatgttcttggtcacctgatggaagcaag
atagcagctggttcagctgacaggtttgtgtatgtgtgggataccacaagccggaggatt
ttgtataagctgcctggacatgctggctccatcaatgaagtggctttccaccctgatgaa
ccaatcattctctcagcatccagtgacaagagactgtatatgggggagattcagtga
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integrated database retrieval system
