Citrobacter farmeri: CI104_07210
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Entry
CI104_07210 CDS
T05012
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CI104_07210
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Gene cluster
GFIT
Motif
Pfam:
rve
rve_2
HTH_28
HTH_21
rve_3
HTH_29
HTH_32
HTH_23
DDE_Tnp_IS240
DUF1153
HTH_20
HTH_Tnp_1
DUF4802
Motif
Other DBs
NCBI-ProteinID:
AST78888
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Position
join(1471930..1472410,1472410..1473299)
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AA seq
456 aa
AA seq
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MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKG
VSADPELRIKVVKAVTEQQMSLNQAAAHFMLAGSGSVAKWLKVYEEHGEAGLRALKIGTK
RNITMSVDPEKAALALELSKDRRIEDLERQVRFLEMRLTYPKKAESLSSSREKVKVLNEL
RQFYPLDELLKAAEIPRSTFYYHLKALSKPDKYADVKKRIGEIYHENKGRYGYRRVTLSL
HRDGERINHKAVQRLMGTLSLKAAIKVKRYSSYRGEVGQTAPNVLQRDFKATRPNEKWVT
DVTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLKPHEHPILHS
DQGWQYRMRRYQNILKEQGITQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELK
DAVTEYIDYYNSRRISLKLKGLSPIEYRTQTYVPRV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagccaaaataccccttcgaaaagcgccttgaagtcgtgaatcactacttcaca
actgatgatggttacaggatcatctctgcacgttttggtgtgcctcgaacccaggtcagg
acgtgggttgccctctatgaaaaacatggagaaaaaggtttaattcccaaacctaaaggc
gttagtgctgatccagagttgcgcattaaggtcgtgaaagccgtgaccgagcagcagatg
tccctcaatcaggctgctgctcactttatgcttgctggtagtggttctgtagccaagtgg
ctgaaagtctatgaggagcacggagaagctggtttacgcgcactcaagatcggcaccaaa
agaaacattacaatgtcagttgatccagaaaaagcggcgttagcattggagctgtcgaaa
gaccgacgtattgaggatcttgaaagacaagttcgattccttgaaatgcggcttacgtat
cctaaaaaagctgaaagccttagctcatcccgcgaaaaagtgaaagtactcaacgagcta
aggcagttttaccctcttgatgagcttctcaaggcagcggagataccgcgcagtacgttt
tattaccatctaaaggctctcagcaagcctgataagtatgcggatgttaaaaagcgtatt
ggtgagatttatcacgagaataaaggtcgttacggataccgtagggtaacgttgtctctc
catcgagacggggaacggattaaccataaagccgttcagcgcctgatgggaaccctctcg
cttaaggcagcgattaaggtcaagcgatacagctcctacagaggagaggtagggcaaacc
gcccccaatgttctccaaagggatttcaaggctacacggccaaacgagaagtgggttacc
gacgttactgaatttgcagtcaatgggcgaaagctgtatttgtctccagtaatagatctc
ttcaacaacgaagttatttcttacagcctgtcggaaagacctgtgatgaacatggtcgag
aatatgctcgatcaggcattcaaaaagcttaagcctcacgagcatcctattctgcactct
gaccagggatggcagtatcgtatgagaaggtatcaaaacatccttaaagaacaaggcatt
acacagagcatgtccagaaaaggcaattgtctggataatgcagtcgtggaatgtttcttt
ggaaccttaaagtcggagtgtttttatcttgacgagttcagtaatataagcgaactgaag
gatgctgttacggaatatattgactactacaacagcagaagaattagcctgaaattaaaa
ggtctgagtccaattgaatatcgaacccagacctatgtgcctcgtgtttaa
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