Citrobacter farmeri: CI104_09335
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Entry
CI104_09335 CDS
T05012
Name
(GenBank) exodeoxyribonuclease VIII
KO
K10906
exodeoxyribonuclease VIII [EC:3.1.11.-]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_09335
DNA repair and recombination proteins [BR:
cfar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CI104_09335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rv2179c-like
Exonuc_VIII
Motif
Other DBs
NCBI-ProteinID:
AST79268
LinkDB
All DBs
Position
complement(1905346..1907628)
Genome browser
AA seq
760 aa
AA seq
DB search
MNTYAYIIKAKAKATDSKSLFCWFSAKSDSRAEREILNLLEDSGIEVGRGADHQLPIRTN
WFVVDDLPEEGTLDDTWCDRYELGEDGLTWKKIVVAEAPAEPAEPAEPAEPAEPAEPAEP
AEPAEPESTVLTAGEQPANDAIPEVNENIQHEQDFTEGEDSHPKYPKLTAVPTMSFRHRV
LAQDIGGGEYMYHVDEEQKKEIIALELDQDNSYIQNLLLAAENVEPFKKANEVDIWKAVN
SVKTVFPVDNKTPELASVIQFLNAWFNTEHIDRGLLTKEWAKGNRLSCIQRTSGGANAGG
GIKTDRNPDYIHTLETLDYEIAAATLPMDFDIYNIPLSIHRRAKEIITKKEGPFKEWSAA
LRETPGILDYSRAAIFALIRGTSSELVKFSVRLRAYINANLTESNHEKPTVDTLAASRQI
NSASVTLDAVHDAINGKNETTIPYGVGEEYAFVGNKLVTEARSRAEQPNIENHGNGVFSI
DSLVNTPPAQPLSVVDQVRQHSAEEKIKSDNNEEATSDVQMEEVVHDEAQAGTEVSQGET
TTMPDESADASGEQTDAVNNESVHQITEQKSDKLYSHLMVDMETMGCGPDAAIVSIGGIF
FDPSSGNTGAEFYQVVRLESSMSFGMKPDASTIEWWLKQSPEARSAILVDDAMGLLETLE
LLADFIAENAANGCRTVQLWGNGCSFDNVILRRAFALTDTPFPVPYWNDRDVRTMVELGK
SVGINPRFDIPFEGDMHNALSDARHQVKYVSAIWQRLTAN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatatgcgtatatcatcaaagccaaagccaaagcgactgactcaaaaagcctc
ttttgttggttctctgcaaaatctgactcgcgcgctgaacgcgaaattctcaaccttctg
gaagattccgggatcgaagttggccgtggtgctgaccaccagttgccaatacgtactaac
tggtttgttgtcgacgatctgcctgaagaaggtacgctggatgacacatggtgtgatcgt
tacgagcttggcgaggatggattaacctggaaaaaaatagtggtagccgaagcaccagca
gaacccgcagaacccgcagaacccgcagaacccgcagaacccgcagaacccgcagaaccc
gcagaacccgcagaaccagaatctaccgtactgacagcgggcgaacaaccagcaaatgat
gcgatccccgaggttaatgaaaatattcaacacgagcaggattttactgagggggaagac
tctcaccccaaatacccaaagttaacagctgtacccaccatgtcattccgacatcgcgtg
ctggcgcaggacattggcggcggtgaatatatgtatcacgtcgacgaagagcagaaaaaa
gaaattattgccctggaactggatcaggataattcatatatccagaaccttctgctcgcg
gcagagaatgttgaaccattcaagaaagccaatgaagttgatatctggaaggcagtgaat
tccgtaaaaacagttttccctgtcgacaataaaacgccagaactggcaagcgttatccag
ttcctgaatgcctggtttaatacggaacatattgaccgcgggcttctaacgaaggagtgg
gctaaaggtaatcgcctgtcctgcatccagagaacttccggtggcgctaacgcaggaggt
ggaattaagactgaccgaaatcctgactacattcataccctggaaacgctggattacgaa
attgccgcggccacattgccgatggatttcgatatttacaatataccgctatccattcat
cgacgcgctaaagaaatcattactaaaaaagaaggcccgttcaaagagtggtctgcagca
ctgcgagaaactcccggcattcttgattactccagagcagctatttttgctcttatccgc
ggcacatcatccgaattggttaaattttctgttcggctacgggcctatatcaacgcaaac
ctgaccgagagtaatcacgaaaaaccgacagttgatactcttgcggcttcccgtcagatt
aattctgcgtcggtaacccttgacgcggttcacgatgccatcaacggtaaaaatgaaacc
acgatcccttatggggtgggcgaagaatatgcctttgttggtaacaaactcgtcactgaa
gcccggtcccgcgctgagcaaccgaatatcgaaaaccacggcaatggtgtcttttccata
gacagcctggttaacacgccaccagcgcaaccactatctgttgtcgaccaggttcgccag
cactcagctgaagaaaaaataaaatcagataacaacgaggaagccaccagtgatgtgcag
atggaagaggttgtccacgatgaagcccaggctggtactgaagtgtctcagggcgaaaca
acaactatgccagatgaaagcgctgatgcttctggtgaacaaacagatgcggtaaataat
gaatccgttcatcaaattactgaacaaaagtctgacaaactttattcccacttaatggtg
gatatggaaactatgggctgtggccctgatgccgcaatagtctctatcggtggcatattt
ttcgatccttcttctggcaacactggtgccgagttttaccaggtcgtcagacttgaatca
tctatgtcgtttggcatgaaacccgatgcgtcgacaatcgagtggtggttaaaacaatca
ccggaagctcgttctgcaattcttgttgatgatgcaatggggctgcttgaaaccctcgaa
cttctggccgacttcatagctgaaaacgctgctaacggttgccgcacagttcagttatgg
ggtaatggatgctcttttgataatgtcattcttcgccgtgcatttgcattaacagatacc
cccttccctgttccgtactggaatgacagggatgtaaggaccatggtcgaattgggtaaa
tctgtgggtatcaatccacgctttgacatcccgtttgaaggtgacatgcacaacgcgctt
tctgatgcccgacatcaggtcaaatacgtgtcagcaatctggcagcgtctgactgcaaac
tga
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