Citrobacter farmeri: CI104_27655
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Entry
CI104_27655 CDS
T05012
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
Organism
cfar
Citrobacter farmeri
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
TraD_N
TraG-D_C
T4SS-DNA_transf
AAA_16
AAA_22
EAD7
TFIIA
Motif
Other DBs
NCBI-ProteinID:
AST82809
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Position
pAUSMDU8141-2:complement(85760..87970)
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AA seq
736 aa
AA seq
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MSFNAKDMTQGGQIASMRIRMFSQIANIIVYCLVILFGIIVAITLSVKLTWQTFVNGMVY
YWCQTLAPMRDIFKSQPVYTIRYYGHELKYNAQQILQDKYIQWCADQVWTAFILAAIIAA
VVCVITFFVTTWILGHQGKQQSEDEITGGRQLTDDPKAVAKMLRRDGLASDIKIGELPLI
KDSEIQNFCLHGTVGAGKSEVIRRLMNYARQRGDMVIVYDRSCEFVKSYYDPATDKILNP
LDARCAAWDLWRECLTQPDFDNVSNTLIPMGTKEDPFWQGSGRTIFAEAAYLMRNDKDRS
YSKLVDTLLSIKIEKLRSYLKNSPAANLVEEKIEKTAISIRAVLTNYVKAIRYLQGIENN
GESFTIRDWMRGVREDGKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV
WIFADELPTLHKLPDLVEILPEARKFGGCYVIGIQSYAQLEDIYGQKPAETLFDVLNTRA
FFRSPSRNIAEFAAGEIGEKEILKASEQYSYGVDPVRDGTSVGKDMERVTLVSYSDVQTL
PDLSCYVTLPGPYPAVKMALKYQQRPKVAPEFIPRTIDGKAEERLNAALAAREHESRSIA
MLFEPDADVVAPEGGAENVGQPQQPQQPQQPQQPQQPQQPQQPQQLTPAPRAADAASVAG
AAGAGGVEPELKTKAEEAEQLPPGISESGEVVDMAAWEAWQAEQDELSPQERQRREEVNI
NVHRAPEKDLEPGGYI
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaatgctaaggatatgacccagggcggtcagatcgcgagcatgcgtatccgt
atgttcagtcaaattgccaatatcatcgtgtactgtctcgtcattctcttcggcatcatt
gtcgcgattacgctgtcggttaaactgacctggcagacgttcgtgaacggcatggtttat
tactggtgtcagacgctggcccccatgcgcgatatttttaaatcccagcctgtctatacc
atccgttattacggccatgagctgaagtacaacgcgcagcaaatactgcaggacaaatat
atccagtggtgcgccgaccaggtctggacggcctttattcttgctgccatcatcgcggcc
gtggtgtgcgttattaccttctttgtcaccacctggattctgggccatcagggtaagcag
cagagtgaggacgagataacgggagggcgccagctgactgacgacccgaaagcggtggcg
aaaatgctcaggcgcgacggtctcgcatccgacatcaaaatcggtgagctgccgcttatt
aaggactcggagatccagaacttctgtctgcacggtaccgtcggggccggtaaatcagaa
gttatccgccgtctgatgaactacgcccgccagcgtggcgatatggtcatcgtgtatgac
cgctcctgtgagttcgtcaaaagctactatgatccggccacagataaaatccttaacccg
ctggatgcgcgctgcgctgcatgggacctgtggcgggagtgcctgacgcagcctgacttc
gacaacgtttccaacacgcttattcctatgggcacgaaggaagaccccttctggcagggg
tcgggacgtaccatctttgccgaagccgcatatctgatgcgcaacgacaaggaccgcagc
tacagcaagctggtcgacacgctgctttccatcaagattgagaagctgcgctcgtacctg
aaaaactccccggcggcgaacctggtggaagagaaaatcgagaaaacggccatctccatc
cgcgccgtgctgaccaactacgtcaaggctatccgctacctgcagggcatcgaaaataac
ggcgagtcattcaccatacgcgactggatgcgcggcgttcgtgaggatggtaaaaacggc
tggctgtttatctcctccaatgctgacacccacgcttccctcaagccggttatctccatg
tggttgtccatcgccattcgcgggctgctggcgatgggggaaaaccgtaaccgccgcgtg
tggatcttcgccgacgagctgcctaccctgcacaagctgccggacctggttgagatcctg
ccggaggcgcgtaagtttggcggctgctacgtcattggcattcagtcctacgcccagctg
gaagatatttacgggcagaagccggcggaaacgctgttcgacgtgctgaacacccgtgcc
ttcttccgctcgccgtcgcgcaatatcgccgagttcgccgctggcgaaatcggtgaaaaa
gaaatcctcaaggcgtccgagcagtattcctacggtgtggacccggtacgcgacggtacc
tcggtcggcaaggacatggagcgcgtcaccctggtgagttactccgacgtccagacgttg
ccggatctctcctgctacgtcacgcttcccggaccttatcctgccgtgaaaatggcgctg
aagtatcagcagcgtccaaaggtggcaccggaattcattccgcgcaccatcgacgggaaa
gcggaggaacgcctgaatgccgcgctggctgcacgtgaacatgaatcccgcagcatcgcc
atgctctttgaaccggatgccgatgttgtcgcgccagagggcggtgcggagaatgttggt
cagccacagcagccacagcagccacagcagccacagcagccacagcagccacagcagcca
cagcagccacagcaactgacgcccgcgccccgcgctgcagacgcggcatccgtagcaggt
gcggcaggcgccggcggtgtggagcctgagctgaagacaaaggcggaagaggcagagcag
ctgccgcccggcatcagtgaaagcggtgaagtagtggatatggcggcatgggaggcgtgg
caggcggagcaggacgaactgtctcctcaggagaggcagcgtcgtgaagaagtgaacatc
aacgttcaccgggcgcctgaaaaggatcttgagccgggaggatacatctga
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