Clostridium felsineum DSM 794: CLFE_027970
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Entry
CLFE_027970 CDS
T08216
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cfb
Clostridium felsineum DSM 794
Brite
KEGG Orthology (KO) [BR:
cfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfb03400
]
CLFE_027970 (addB)
Enzymes [BR:
cfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLFE_027970 (addB)
DNA repair and recombination proteins [BR:
cfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLFE_027970 (addB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
URZ16750
LinkDB
All DBs
Position
complement(2942293..2945751)
Genome browser
AA seq
1152 aa
AA seq
DB search
MSLRFIYGRAGSGKSQFCISSIKNRIEKGGDRPLILIVPEQFSFQSEKSILDLIGEKSIN
RVKVISFKRLAYRVFDEVGGIAREYMNSSGKSMLFYHIMNNLKSEFKVFGLSARQKGFVN
TISDTISEFKKYELTTDLLRETIDNVEDEELKNKLHDLSLIYDEFNRLLYKNYIDPDDDL
TILKEKIKYSEMLSGAEIWLDEFSSFIPQQYGVLEELLKRCTRVNIALTMEYESIPMDDD
IFSVTKNTERRMIKIAQDNNVSIDKPVNLNKRPFYRFKNSYELGMIEKNLYSFPYEIYKD
KPKKIQIFKTSNLYTEVEDIARNIIKFVREDNVRFSDIAVVTGNLEGYEKTVAVIFKEYG
IPFFIDKNKDIEDNTLIILIRSIMDIFIKNWSYETVFRYLKTGFVDIDIDEIDILENYVL
AAGIKGKKKWTDKWTYDVYSDGLSGEISEENKEKIEKVNEIKDKFLKPLLDFRKKVLRKN
NVTEICTALFEFLHDINVPVAVEKMVDEFRKNGRQILANEYSQIWNILMELMDQLVEVMG
NEKVNLEQFSRILFIGIKEHKMGLIPSSLDQVLVGSIDRLKSHAIRFLYIMGVNDGVFPS
AAMEEGILSDRDREVLMSKGVELAKDTKTQAMEQRFLVYTAITNSSEYLFLSYPIADYEG
KTLRPSLIINRIKTLFPKIIEKSDVIKAENDEEDMKLISSTVPTFNEMISSFRKEIDEDD
KISGIWHDVYRWYAKNEKWAEKCESMFKAIAYTNQVDYISKEKALKLYGGSLKMSVSRLE
KYIECPFSYYVQYGLKIKDRKIFTLTPPDLGSFMHKVIDKFCENIKDENIDWKDVNEDIC
EQKIYKIVDQEVEGRGGSILNSSPRYSYITSRLKRILKRTATIVAEQFRRGSFRPVGYEV
AFENGGNYPPIKVILHDNTEVILTGRIDRIDMLEKDGNTYIRIVDYKSGNKIFKLSDVYY
GFDIQLLLYLNAILENENVDEDDRFLPGAILYFTMDDPIVKGKENLTDNQIKDEIMKSLK
MKGLLISDPEVVKEMDREMEGSSLIIPASIKKDGTLGRSSAATKQQFEMLIKHVRNLVVK
NCEKLLMGDIKIRPYKKGKDKPCDYCTYSSICRFDTIFDGDTYRYVKEKSDEEVWKLVDI
EVEEEGDKDGKN
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttgagatttatatatggaagagcaggaagtggcaaaagccagttttgtattagt
agtataaaaaatagaattgaaaaaggcggagataggccccttatattaattgtgccagag
caattttcctttcaaagtgaaaaaagcatattagacttaattggagaaaaaagcatcaat
agagttaaggtaataagttttaagagattagcatatagagtttttgacgaagtgggaggc
atagctagagaatatatgaattcgtcaggcaaaagtatgcttttttatcatataatgaat
aatttaaaaagtgaattcaaagtctttggtctttcagcaagacaaaagggatttgtaaat
actatatcggatacaataagtgaatttaaaaaatatgaacttacaactgatttacttaga
gaaactatagataatgtagaggatgaagaacttaaaaataagttacatgatttaagttta
atatatgatgaatttaatagacttttatataaaaattatatagatccagatgatgattta
acaatacttaaagaaaagataaagtactcagaaatgttgtcgggagctgaaatatggcta
gacgaattttcaagctttattccccaacaatatggtgtattagaagagttattaaaaaga
tgtactagagttaatattgcgttaactatggagtatgaaagtattcctatggatgatgat
attttttctgttactaaaaatacagaaagaagaatgataaaaatagctcaagataataac
gtaagtatagataaaccagtaaacttaaataaaagaccattttatagatttaaaaatagt
tatgaactaggcatgatagagaaaaatttatacagtttcccatatgaaatttataaagat
aaacctaaaaagatacaaatttttaaaacttcaaatttgtatacagaagttgaggatata
gcgagaaatattattaaatttgttcgtgaagacaatgtaagattttcagatatagcagtt
gtaacaggaaatttagaaggctatgaaaaaaccgtggctgttatttttaaggaatatggt
atacctttttttatagataagaataaggatatagaagataacacacttatcatacttata
agatctattatggatatttttattaagaattggtcctatgaaactgtatttagatatctt
aaaacaggttttgtagatattgatatagacgaaatagacatattagaaaattatgtttta
gcagcaggcataaaaggaaaaaagaagtggactgataaatggacttatgatgtttatagt
gatggcttatcaggtgagatttcagaggaaaataaagaaaaaatagaaaaggtaaatgag
ataaaagataaatttctaaaaccacttttagattttagaaaaaaagtattaagaaaaaac
aatgtaacagaaatatgtactgcattatttgaatttttacatgatataaatgttccagtg
gctgtagaaaaaatggtagatgaatttagaaaaaatggtaggcagattttagccaatgag
tacagtcaaatatggaacatattaatggagttaatggaccagttagttgaagtaatggga
aatgaaaaagtaaacctagaacaattttctagaatactttttataggaataaaagagcat
aaaatgggacttataccatcttctcttgatcaagtacttgttggtagtatagatcgtctt
aaaagccatgccataaggtttctttatataatgggtgtaaatgatggagtttttccatca
gcagcaatggaggaaggtatattaagtgatagggatagagaagttttaatgtcaaaaggc
gtggaacttgcaaaggatactaaaactcaagctatggaacaaagatttttggtttatact
gctattacaaattcaagtgagtatttattcttaagttaccctatagctgattatgaaggt
aaaactttaaggccatctcttataataaacagaataaagacgcttttccctaaaataata
gagaagagtgatgtaataaaagctgaaaatgatgaggaagacatgaagcttatttcttca
acagtacctacttttaatgaaatgatatcatcgtttagaaaagagatagatgaagatgac
aaaattagcggtatatggcatgatgtatataggtggtatgctaaaaatgaaaagtgggct
gaaaaatgtgaaagtatgtttaaagcaatagcttatactaatcaggttgattatataagc
aaagaaaaagctttaaaactttatggtggtagtcttaaaatgagtgtttcaaggcttgaa
aaatatatagaatgtccgttttcttattatgtgcaatatggacttaaaataaaagataga
aaaatatttactttaacaccacctgatttaggttcttttatgcacaaagtaatagataaa
ttttgtgagaacataaaagatgaaaacatagactggaaggatgtaaatgaggatatatgt
gagcaaaaaatatacaaaatagtagatcaagaggtggaaggtagaggaggttcaatactt
aacagttctccaagatatagttatataacctcaagacttaaaagaattttaaaaagaaca
gcaacaattgtagctgaacagtttagaagaggaagctttagaccagttggatatgaagtg
gcttttgaaaatggaggaaattatccaccaataaaggttatacttcatgataacactgag
gttattttgacaggtagaattgatagaatagatatgctagagaaggatggcaatacctat
ataagaatagtagattataaatctggaaataaaatatttaaactttcagatgtgtattat
ggtttcgatatacagcttttactataccttaatgcaattctagaaaatgaaaatgtagat
gaggatgatagatttttgccaggagctatactctattttacaatggatgatcctatagta
aaaggaaaagaaaatttgacagataatcaaattaaagatgaaataatgaaatcactcaaa
atgaagggactcttgatttctgatccggaagttgtaaaagaaatggatagggaaatggag
ggaagctctcttataattcctgcatccattaaaaaggatggtacacttggaagatcaagt
gcggcaactaaacagcagtttgaaatgttgataaaacatgtaagaaatttagtggttaaa
aattgcgagaagcttttaatgggagatataaagataagaccttataaaaaggggaaagat
aaaccttgcgattattgcacttattcttcaatctgtaggtttgatacgatttttgatggt
gatacttatagatatgtaaaagaaaaatcagatgaagaagtctggaagcttgtagatata
gaagttgaagaagagggtgataaggatgggaaaaactaa
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