Corynebacterium freiburgense: CFREI_04960
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Entry
CFREI_04960 CDS
T09215
Symbol
sigE2
Name
(GenBank) ECF RNA polymerase sigma factor SigE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
cfg
Corynebacterium freiburgense
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfg03021
]
CFREI_04960 (sigE2)
Transcription machinery [BR:
cfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFREI_04960 (sigE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_AsnC-type
Xre-like-HTH
HTH_17
TnsD
Motif
Other DBs
NCBI-ProteinID:
WJZ02288
LinkDB
All DBs
Position
1044927..1045640
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AA seq
237 aa
AA seq
DB search
MAIHFKVTLYKRIQALSVVLLEIRGYTSTTMQNRIMITRADESPSDDIEASLSGTAAFDA
GQGEMPSWAELVQEHADSVYRLAFRLTGNQHDAEDLTQETFMRVFRSLKNYKPGTFEGWL
HRITTNLFLDMVRHRNKIHMEALPEDYDRVPGNDMTPEQAYHFANLDPALQRALDELSPD
FRVAVVLCDVVGMTYDEIADTLGVKMGTVRSRIHRGRSQLRASLEANPDAEQFVAAQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggcaatccattttaaagtcacgttatataaacgaatccaagctctcagcgtggtctta
ttggagattaggggctatactagtacaacaatgcaaaatcgaatcatgatcacgcgcgca
gatgagtccccatccgacgatattgaggcatcattgtctggaactgcagcttttgatgct
ggtcaaggggagatgccttcctgggctgagttggtccaggaacatgcggatagtgtgtat
cgcttagcgttccggttgactggtaaccaacatgatgcggaagaccttacccaagaaacc
tttatgcgggtattccgttcgctcaaaaactataaacctggaacttttgagggttggctg
caccgtattactacgaacctcttcttagatatggttcggcatcgcaataagatccatatg
gaagctttgcctgaggattatgatcgcgttccaggcaatgatatgactcctgaacaggca
tatcactttgccaatttagatcctgctttgcaacgtgcactggatgaattgagtccagac
ttccgtgttgcagtggtgttgtgtgatgttgtgggcatgacctatgacgaaatcgcagat
acccttggtgtgaaaatgggtacagtccgtagtcgtattcaccgaggtagaagccagtta
cgtgcaagtttagaagcgaatccggacgccgaacaatttgtcgcggcgcaataa
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