Cellulomonas fimi: Celf_2125
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Entry
Celf_2125 CDS
T01490
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cfi
Cellulomonas fimi
Brite
KEGG Orthology (KO) [BR:
cfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfi03016
]
Celf_2125
Enzymes [BR:
cfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Celf_2125
Transfer RNA biogenesis [BR:
cfi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Celf_2125
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AEE46253
UniProt:
F4H106
LinkDB
All DBs
Position
2357042..2358316
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AA seq
424 aa
AA seq
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MHSEVADDARDTGDDVTPTPVVPDVVPLVEPADGVPHVVDTPEELARVVAAFGAGTGPVA
VDAERASGYRYGQRTYLVQLRREGAGTALIDPVALPDLSALSEALVGVEWVLHAASQDLP
GLTEQGMRPTRIFDTELGARLLGMERVGLAAVVADALGLGLAKEHSAVDWSTRPLPQEWL
RYAALDVEVLVPLREVLAERLAVAGKAEWAAQEFEAVRTAPTPPPRVDPWRRVSGLHQVK
DARRLAVVRELWLTRDQNARQRDISPGRVLPDAAIVAAAQALPRSVPQLTALPAFSGKGT
RRRATLWQQAIDRGLALPDAELPSVRGPRSDAPPPPRAWADKDPAAAARLAAARDVVAEL
SATHDVPAENLLQPDLLRRLCWAPPARLDAAGIAEFLAAGAAREWQVGLLAERLATAFAG
LSRS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcactccgaggttgccgacgacgcccgtgacaccggggacgacgtcacgccgaccccg
gtggtccccgacgtcgtgccgctggtcgagccggccgacggcgtgccgcacgtcgtcgac
acgcccgaggagctcgcgcgcgtggtggccgccttcggggccggcacgggtcccgtcgcc
gtcgacgccgagcgcgcgtcgggctaccgctacggccagcgcacctacctcgtgcagctg
cgccgcgagggcgcggggaccgcgctgatcgacccggtggcgctgccggacctgtcggcg
ctgtcggaggcactcgtcggcgtcgagtgggtgctgcacgccgcgtcgcaggacctgccg
gggctcacggagcagggcatgcgcccgacgcgcatcttcgacaccgagctcggggcgcgg
ctgctgggcatggagcgcgtgggcctggccgcggtcgtcgcggatgcgctcggccttggc
ctggccaaggagcactcggccgtcgactggtcgacccgccccctgccgcaggagtggctg
cggtacgcggcgctcgacgtcgaggtcctggtcccgctgcgcgaggtgctcgcggagcgg
ctcgccgtcgccggcaaggccgagtgggcggcgcaggagttcgaggcggtgcgcaccgca
cccacgccgcctccgcgcgtcgacccgtggcgccgcgtctcgggcttgcaccaggtcaag
gacgcgcgccggctcgccgtcgtgcgcgagctctggctgacgcgcgaccagaacgcccgc
cagcgcgacatctcccccggccgtgtgctgcccgacgccgcgatcgtcgccgccgcgcag
gcgctgccgcgctcggtgccgcagctcacggccctgccggcgttctcgggcaagggcacc
cgccgccgcgcgacgctgtggcagcaggcgatcgaccgggggctcgcgctgccggacgcg
gagctgccctcggtgcgcggcccgcgcagcgacgcacctcccccgccgcgcgcgtgggcg
gacaaggacccggcggccgcggcccgtctcgcggcggcgcgcgacgtggtcgccgagctc
tcggcgacgcacgacgtcccggcggagaacctgctgcagccggacctgctgcgtcgcctc
tgctgggctcccccggcacgcctcgacgccgccgggatcgccgagttcctcgccgcgggc
gccgcgcgcgagtggcaggtcgggcttctcgcggagcggcttgcgacggcgttcgcgggg
ctgtcgcgcagctga
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