Chitinophaga filiformis: MYF79_17325
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Entry
MYF79_17325 CDS
T08225
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cfil
Chitinophaga filiformis
Pathway
cfil02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MYF79_17325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfil03021
]
MYF79_17325
Transcription machinery [BR:
cfil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYF79_17325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_38
GerE
HTH_24
HTH_29
HTH_Tnp_4
HTH_40
HTH_Tnp_ISL3
HTH_10
HTH_28
HTH_3
Xre-like-HTH
HTH_17
HTH_16
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
UPK66699
LinkDB
All DBs
Position
4371832..4372422
Genome browser
AA seq
196 aa
AA seq
DB search
MPEVLDNETALLERMAKGDKDAFQVIYYHYAPRIYGKLLKLLHSEDLASELLQEVFIIVW
QKHALIDPERSFRSYLFKIADNLAIDLFRKANRSAQLINRLLEASIDHYTHTEERLEQKE
NAFLLQTAIDALPPQRKLVFTLCKLEGKSHDEVSRLLGISPSTVNNHVVKATQFLREYLA
GRPDITGMLLLWFLFK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggtcctagataatgaaacagcattacttgaaagaatggcgaagggtgataag
gatgcctttcaggtaatctattaccattacgcgccaaggatatacggcaaactcctgaaa
ttgttacattccgaagacctggcttcagaactgctgcaggaggtgtttattatcgtctgg
cagaaacatgccctgatcgatccggagcgttcattccggtcttaccttttcaaaatagca
gacaacctggccatagaccttttccggaaggccaatcgaagcgcccagttgatcaaccgc
ctgctggaagccagtattgatcattatacgcatacggaagaaaggctggagcaaaaggag
aatgcattcctgctccagactgccattgatgccttacccccgcaacgtaaacttgtattt
accctctgtaaactggaggggaagagtcatgatgaagtaagccgtttattaggtatttct
ccatctaccgttaataatcatgtagttaaggctactcaattcctgcgggagtacctggcc
ggccgtcccgacattacgggaatgctcctgctttggtttttatttaaataa
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