Cytobacillus firmus: NAF01_12310
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Entry
NAF01_12310 CDS
T08260
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00521
Streptomycin biosynthesis
cfir00523
Polyketide sugar unit biosynthesis
cfir00541
O-Antigen nucleotide sugar biosynthesis
cfir01100
Metabolic pathways
cfir01110
Biosynthesis of secondary metabolites
cfir01250
Biosynthesis of nucleotide sugars
Module
cfir_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NAF01_12310
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NAF01_12310
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NAF01_12310
Enzymes [BR:
cfir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NAF01_12310
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Motif
Pfam:
dTDP_sugar_isom
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
URT73182
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Position
complement(2420111..2420569)
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AA seq
152 aa
AA seq
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MIDGVKVKKLIKHCDDRGFFSELIRDNEPEFLSRFGQASWSMSYPGVIKAFHYHEKQDDL
WFFPSGNAQVVLYDLRKDSPTHGTTDVYYMGEENPIMLFIPRGVAHGYRVLGQEPAVIIY
FTTESYNLKDPDEKRIPWDDPLIAFNWSTDNR
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgatagatggggttaaggtaaaaaaacttattaagcattgtgatgacaggggctttttt
tcagaacttattcgtgataatgagcctgagtttttatcaagatttggccaggcatcgtgg
tctatgagttacccaggtgtaattaaagcttttcactatcatgaaaagcaggatgattta
tggttttttccttcaggtaatgctcaagttgttctttatgatttaagaaaagattcaccg
acgcatgggacaacagatgtttattatatgggggaggaaaaccccattatgctttttatt
cccagaggtgtcgcacatgggtatagagtacttgggcaagagcccgcagtgataatttat
tttacaactgaatcctataacttaaaagatcctgatgaaaagcggattccttgggatgac
cctttgatcgcatttaattggtcaactgataaccgataa
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