Cytobacillus firmus: NAF01_22950
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Entry
NAF01_22950 CDS
T08260
Name
(GenBank) leucine-rich repeat domain-containing protein
KO
K13730
internalin A
Organism
cfir
Cytobacillus firmus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
fn3
LRR_8
Pur_ac_phosph_N
Gram_pos_anchor
Interfer-bind
LRR_9
Motif
Other DBs
NCBI-ProteinID:
URT70604
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All DBs
Position
complement(4566578..4570456)
Genome browser
AA seq
1292 aa
AA seq
DB search
MKKRKSWLNIAMIMAIIFSLISPISQTQGLTTAAAMIDLADPVVEDGKVTLTWKTILSVQ
DQGPETYKIIKNDEVLDVEPTLLSNEILGEDVVKTYEYMDQAAAEEQVYVYSIKGQQGDV
ELTSTAKTVSVYIEDNQSSQEESKEPVQQAAEKSAETAEPSEGSQEQPASEQDSVPAEEP
ANPDAEEVILDNPNLEKIIREQLPKPEGAVVKEDLEKLTFLNVNDRFGDINSLKGLELAV
NLKHLIIEDVSISDISVLGNVTNLTELKLNSLPLENINSLLMLPLLEKVQIGNLEMDLSQ
SEVLRDLSHRGIHIEMLDDSKSFLLDVYRITESSAQVSWGMYGKGKIDKYTLTVNGEINA
TLNGDIYEYHLTGLKPSTSYNIKVSALSTGSVLAEKEYTFNTLAAPLGEKVSITDPNLEA
AIKEELGLDRELYTSDMERLTALFAPGMEIETLDGLEHAMNLDHLVIYDNRVEDLTPLKN
LTKLVILDIGDNPFSDSSAIVNLKNLANLDVSYTEFEDFIFLKELPSLQTVYLYGNLQIE
DHAPSIEALEYLQSKGVEVNYDFDENVNMEIYTDFVNESKIGISWDYWTEEEDDYSYPDQ
YVLSVDGVEKEISSETNSEIFTGLKPETEYSFKVKAYQEGKLIGKAALTVSTASLPTGEI
IHFPDKKMEKALKERLGLDRDIQESDMLSLVSIDLSSAGITDLSGLEKAVNLEDLSLWDN
NIKDLSPLGGLTHLMSLDLDGNPITDLKPLKGLSNLFALFLSNTGIKDFSSLNNLSGLMY
LTLSNNGIGTIPDLSGLKNLEILELSSNNITSLKGLEGLSNLMMLTIESNPVSDFSALSK
MKLLFLDASYTDMQNLKWAADLTQLEGLAVAGNNLSDISPLKNLKNLSMLMANDNQISDI
GVLLELERLEYVTLFNNEGLDLADGSEAMKIIEQLLAKGVFVEYENIEEGMLYFDSINST
SSTIDVSWIYEGEEEIEEYQLYLNGELIGSADPSDPFYTFEGLEPGKEYEIMVEAWSGEE
IIDYGFAFVWTLSEDLNFIDVSTTDSSIEASWEYTGDEELSGYNVYLDGEYLEFIDAETN
DYTFEELMPRTSYTLALEAVNTEESVVSYTSTDVQTESDSAVKFVDVTAAENTIEAYWEY
AGAEIDEYSLYLDGELAATLGPEESFHEFTGLEEATEYEISIEAILEGEVVASDSLLIST
EEAGKDDGGTVPGKNPGKGGTPDKDKGKPGLPAKDQNVKDNKPAKQAVKNTKSGKKLPNT
ATNMYNMLALGLTLLFAGSMLMLWHSRRKKLV
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagaaaaagctggttaaacattgcaatgattatggctattattttctccctt
attagtccaatttcacagacacaaggactgacaactgcagctgccatgattgatttggcg
gaccctgtggtggaggatggaaaggtaacgttaacctggaaaaccatattatctgtccag
gatcaaggcccggaaacctataagatcattaaaaacgatgaagtcctggatgtcgagcca
actttgctatccaatgaaatcctgggggaagatgtcgttaaaacatacgagtatatggac
caggctgccgcagaagagcaggtatatgtttactctattaagggccaacagggtgatgtg
gagttaacaagtactgcaaaaacggtatcggtatacatagaggataaccaatcctcacaa
gaagaaagtaaggaacctgtgcaacaggccgcagaaaaaagcgctgaaactgccgagcct
tcagaaggcagccaggaacagccggcgtctgaacaggattccgttccagccgaagaacca
gctaatcctgatgctgaagaggttatcctggataaccctaatcttgagaaaatcatccgc
gagcagctgcctaaaccggaaggcgctgttgtaaaagaagacctggaaaagttaactttc
ctgaatgtaaatgaccgatttggagatattaatagtttgaaaggattagagcttgcggtt
aatttaaagcatctaatcattgaagatgtatcgatatcagatatcagcgtccttgggaac
gtaacaaatcttactgaattaaaactaaattcattgcctttagagaatattaatagtctt
ttaatgcttccccttctggaaaaagttcaaatcgggaatctggagatggacctaagtcaa
tcagaagtgctaagggatttatctcatagaggcattcacattgaaatgttagatgacagt
aaatcgtttcttttagatgtttatcggattaccgagtcctctgcccaagtttcgtggggt
atgtatgggaaaggcaagatcgacaaatatactttaactgttaacggagaaatcaatgcc
acactgaatggtgacatatatgaataccatttaacaggcctgaagccatcaacctcctac
aatattaaagtaagcgccttaagcactggaagtgtattggcagaaaaagaatataccttt
aatactttagcggcgccactaggagaaaaggtttcaataacagatcctaatctcgaagca
gccatcaaggaagagcttggccttgatcgagaactttacacgagtgacatggaaagatta
acggctctctttgctccgggcatggaaattgaaacacttgatggtttggagcatgccatg
aatttggaccatctggttatttatgataacagagtagaggatttaactcctcttaagaat
ctaacaaagcttgtcatcctggatattggcgataaccctttttcagattcttccgctatt
gtgaatctgaagaacttagccaatctggatgtatcctacacagaatttgaagatttcatt
ttcttaaaagaacttccaagccttcaaacggtttatctttatggaaatcttcagattgag
gaccatgcgccatctatagaggcacttgaatatcttcaatcaaaaggtgtagaagtaaac
tacgactttgacgagaatgtgaatatggagatctatactgattttgtgaatgaatcaaaa
atcggaatctcctgggactattggacagaggaagaggatgattactcctacccggatcaa
tacgtgctttctgttgatggggttgaaaaagaaatctcaagtgaaacaaattcagagatt
ttcactggcctgaagccggagacagaatatagctttaaagtaaaagcttatcaggaagga
aaattaatcggaaaggcagcgttaacggtaagtacagcttcactgccaactggagaaatt
attcattttccggataagaaaatggaaaaggcattgaaggaaaggcttggactcgatcgg
gatattcaggaaagtgacatgctctcgctggtatcgattgacttatcatcagctggaatc
acagacctatccggcttggaaaaagcggtcaacctggaggacctgtctctttgggataat
aacatcaaagacctatccccattaggcgggttaacacatttaatgagtctggatttggat
ggaaatccgattacagaccttaaaccgcttaaaggattatctaatctgtttgcattgttt
ctttctaatacagggattaaagacttttccagcttaaataacctatccggtttaatgtat
ttgacactctcgaataacggcatcggaaccattccggacctgtccgggctaaaaaacctt
gaaatattggaactgagcagcaataacataacatctctgaagggtcttgaaggactgtca
aacctgatgatgctgaccattgaaagcaatccggtttccgacttttcagcactgtccaaa
atgaagctgttatttttggatgcttcttatacagatatgcaaaaccttaagtgggcggca
gatctgacccaattagagggccttgcagttgctggaaacaatctcagcgatatctcaccg
ctgaagaacttgaaaaacttatccatgcttatggcaaacgataatcaaataagtgatatt
ggagttcttcttgagcttgaaaggctggaatatgtaactttatttaacaatgagggactg
gatctggctgatggctccgaagcaatgaagatcattgagcagctgctggcaaagggagtc
tttgttgaatacgaaaacattgaggaaggaatgctttactttgactcaattaactcaaca
agcagcaccattgatgtttcctggatttatgaaggggaagaggagattgaggaatatcag
ctgtatctgaatggtgagctaataggaagcgcagatccatctgaccctttctataccttt
gaaggattggaacctggaaaagaatatgaaatcatggtagaagcatggtctggagaagaa
attatagattacggctttgcttttgtatggaccctgagcgaagatttaaatttcatagat
gtcagtacaacagatagctcaattgaagcctcttgggaatatacaggggacgaagagtta
agcggctataatgtctatttggatggcgagtacctggagtttattgacgcagaaacaaac
gattataccttcgaagaattaatgccgagaacatcctataccttagccctggaagcggtc
aatacagaagaatctgttgtttcttatacctccaccgacgttcagacagaaagtgacagt
gctgtaaagttcgtggatgtcacagcagcagaaaacacgattgaagcttattgggaatat
gcaggcgcagagattgatgaatattccctctatctggatggagaattggcggcaaccctg
ggtcctgaagaatctttccatgaattcaccggcttagaagaagccactgaatacgaaatt
agcattgaagctattttggaaggagaagttgttgcgtctgattcgctgctaattagcacg
gaagaagccgggaaagatgatggcggcactgttcctggtaaaaatccaggcaaaggcgga
acaccggataaagataaaggaaaaccgggtttaccggcaaaagatcaaaatgtgaaagat
aacaagccagccaagcaggctgtaaaaaacactaaatcaggcaagaagcttccaaataca
gcgacgaatatgtacaacatgctggcgctgggattgactttgttattcgctgggtccatg
ctcatgctatggcacagcagaagaaagaagcttgtataa
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