Colletotrichum fioriniae: CFIO01_08117
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Entry
CFIO01_08117 CDS
T04796
Name
(GenBank) 4 family polyadenylate binding protein
KO
K13126
polyadenylate-binding protein
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03015
mRNA surveillance pathway
cfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CFIO01_08117
09123 Folding, sorting and degradation
03018 RNA degradation
CFIO01_08117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfj03019
]
CFIO01_08117
03041 Spliceosome [BR:
cfj03041
]
CFIO01_08117
Messenger RNA biogenesis [BR:
cfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CFIO01_08117
mRNA cycle factors
Stress granule specific factors
CFIO01_08117
Spliceosome [BR:
cfj03041
]
Complex C
Other components
Complex C specific factors
CFIO01_08117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
Nup35_RRM
YflT
RR_TM4-6
NPR3
Motif
Other DBs
NCBI-ProteinID:
EXF80402
UniProt:
A0A010QK79
LinkDB
All DBs
AA seq
770 aa
AA seq
DB search
MASATNNGAVDQLANDLGNASLNGSDSKAAPAINTNVESAAQGDNADTAGPTPSSAAPHP
QASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEK
ALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS
CKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEM
KANFTNIYVKNIATEVTDDEFRDLFAAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAASK
AVDDLNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARMEKANKYQGVNLYIKNLDDEVD
DEKLRQLFADFGPITSAKVMRDNATDSGNEEEEGSSEETDKENKKEEVKAEEKEEAEKTE
EKEDGEKTEKKSDKKPHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKD
VRKSQLEASIQARNQLRMQQAAAAAGMPQQYMQPPVFYAAGQQPVFPQGGRGMPFPQGGM
AMPPVQGGRPGQFPGGYPQQGGRGVPQQMPPVYGMPGSFPPGGAYPQPGNPQFMAAIQQV
QQATMGGGRGGPQGGRGPVPQGMPIPGGPGMPGFPPNARQGGSQPGAGRGANPNAPRNAP
FPQGGRGAPTQELNSGSLIQQQLAAAGGNPGQQKQILGEVIFPKIQAIQPELAGKITGML
LEMDNAELVNLIEEESALKAKVDEALGVYEEYIKAQGGEEGEKKTEETKA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctaccaacaacggcgctgtcgaccagctcgccaacgacctgggcaacgct
tccctcaacggctctgactccaaggctgcccccgccatcaacaccaacgttgagtctgcc
gctcagggcgacaatgccgacaccgcgggccctaccccaagctccgctgcgcctcacccc
caggcctccgcctccctctacgttggcgagctcgatccctctgttaccgaggccatgctt
ttcgagctcttctctcagattggttctgtcgcttccattcgtgtctgccgtgatgcggtt
acccgccgctctctcggctacgcctacgtgaactacaacactacctccgatggcgagaag
gctctcgaggagctcaactacaccctcatcaagggccgtccctgccgcatcatgtggtcc
cagcgtgaccctgctctgcgtaagactggccagggcaacgtcttcatcaagaacctcgat
gtcgccatcgacaacaaggctctccacgacacctttgctgctttcggtaacattttgagc
tgcaaggttgcccaggatgagaacggcaactccaagggctacggtttcgttcactacgag
accgacgaggctgcttctcaggccatcaagcacgttaacggcatgcttctgaacgagaag
aaggtttacgtcggccaccacattcccaagaaagaccggcagagcaagttcgaggagatg
aaggccaatttcaccaacatctacgtcaagaacatcgccaccgaggtcaccgacgacgag
ttccgcgacctctttgccgccttcggcgacgtcacctcttcctcgcttgcccgcgaccag
gaaggcaagagccgcggctttggcttcgtcaacttcactactcatgaggctgcttccaag
gctgtcgatgaccttaacggtaaggacttcaagggacaggatctgtacgtcggcagagcg
cagaagaagcacgagcgcgaggaggagctccgcaagtcttacgaggctgctcgcatggag
aaggccaacaagtaccagggtgtcaatctgtacatcaagaacctcgacgacgaggttgac
gacgagaagcttcgccagctgttcgccgactttggccccattacttctgccaaggtgatg
cgcgacaacgccaccgactctggcaacgaggaggaggagggttcctccgaggagacggac
aaggagaacaagaaggaggaggtcaaggccgaggagaaggaagaggccgagaagaccgag
gagaaggaggacggcgagaagaccgagaagaagtcggacaagaagccccatggtaagtcc
aagggcttcggcttcgtctgcttcagcaaccccgacgacgccaccaaggcagttgccgag
atgaaccagcgcatggtcaacggcaagcctttgtacgtcgctcttgctcagcgcaaggat
gttcgcaagagtcagcttgaggctagcatccaggctcgcaaccaactccgcatgcagcaa
gccgccgccgctgccggtatgccccagcagtacatgcagccccccgtcttctacgccgcg
ggccagcagcccgtctttccccagggtggtcgcggcatgcccttcccccagggcggcatg
gctatgcctcccgttcagggtggccgtccgggccagttccccggaggatacccccagcaa
ggcggacgcggcgttccccagcagatgccccctgtctacggcatgcctggctccttccct
cccggaggtgcctaccctcagcctggtaacccgcaattcatggctgccatccagcaggtg
cagcaggctaccatgggcggtggtcgcggcggtccccagggcggccgtggtcccgttccc
cagggaatgcccatccccggcggccccggcatgcccggcttcccccctaacgctcgccag
ggtggtagccagcccggcgccggccgtggtgccaaccccaacgccccccgcaacgctccc
ttcccccagggtggtcgtggagcccctacccaggagctcaacagcggcagcctcatccag
cagcagctcgctgccgctggcggtaaccccggccagcagaagcagatcctcggtgaggtc
atcttccccaagatccaggctatccagcctgagcttgccggaaagatcaccggtatgctt
ctcgagatggacaacgctgagcttgttaacctcatcgaggaggagtctgctctcaaagcc
aaggtcgacgaggccctcggcgtctacgaggagtacatcaaggcccagggtggcgaggag
ggcgagaagaagaccgaggagactaaggcctaa
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integrated database retrieval system
