Camponotus floridanus (Florida carpenter ant): 105254396
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Entry
105254396 CDS
T03919
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03013
Nucleocytoplasmic transport
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105254396
09122 Translation
03013 Nucleocytoplasmic transport
105254396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105254396
03041 Spliceosome [BR:
cfo03041
]
105254396
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105254396
Spliceosome [BR:
cfo03041
]
Complex C
Other components
EJC/TREX
105254396
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105254396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
GNAT_acetyltr_2
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
105254396
NCBI-ProteinID:
XP_011261348
UniProt:
E2ANQ3
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MATFEILRKDYSDYLQQYFKLSDVSLFQKKCVERCGNDGDRKAAIDQALRDTLLVILTEN
ASDNVHSLEMYITFCIELCRKDLATASMPVMLLGDIFDSMTLDKCEQLFTFVENNVTIWK
EDLFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGSEKVEGDDLEQITKDDDKSENKIPIDYNLYRKFWALQDFFRNPNQCYVKVHWKV
FSAHASNVLSAFASFKLEDQRSYPTTCINMDSSMEGSYKETHYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLIVFQYLNSTVKFKAETHELKPDQVEWVKTTTEQVYALLTETPPDGPAF
AETVKNILKREEHWNAWKNEGCPPFKRPASDIIDGDEEPRKPKRPKRRIGDVIRDAQAVG
KYHMGNLELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDDKYKKVND
GNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDTKLETEETPP
SESNDQEFNEDVLKQDSEQDSESTDIKARKLNKVTPEMVGKLSENLKNDWKKLATKFGYT
NDEIAFFESKTTPYEQCKTMLEIWAEEDEDASVENLAYILEGLKYTEALTVLKS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctacgttcgagattttgagaaaagattatagtgattatttgcagcaatattttaag
ctgtcggatgtctcattgtttcaaaagaaatgcgtcgaacgttgtgggaacgatggcgac
agaaaagcagcgatcgatcaggcgctgcgtgacactctattggtgattttgacagaaaat
gcatcggataatgttcattctttggaaatgtatatcaccttctgcatagagctgtgcaga
aaggatctagcgacagctagtatgccagtcatgctattgggtgacatcttcgattcgatg
accctggataaatgcgaacaattgttcacctttgttgaaaataacgttaccatatggaag
gaggacttgttcttcactgcttgcaagaacaatttgttaagaatgtgcaatgatttatta
aggagactgtcacgttcgcaacaaactgttttttgtgggagaattttgttgtttcttgct
aagttttttcccttttcggaaagatcaggtttgaatatcgtcagtgaatttaatctagaa
aatcatacggaatttggttctgaaaaagtggaaggagatgatctggagcaaataactaaa
gacgacgacaagtcagaaaataaaataccaattgattataatttgtacagaaaattttgg
gctctgcaagacttctttagaaatccaaatcagtgttatgttaaagtgcattggaaggtg
ttttcagctcatgcatctaatgtactgtcggcatttgcatcttttaaattagaagatcag
cgtagttatcctacaacatgtataaatatggactcttcaatggaaggctcttacaaggaa
actcattacttcgcaaaatacttgactaatcagaaattactagaattgcagctgtctgat
tctaatttcagacgatacgtattactgcaatttctcattgttttccagtatctgaatagc
actgtaaagttcaaggctgagacacatgagctcaaaccagatcaggtggaatgggtgaag
actactacagaacaagtctatgctctattgacggaaacaccgcccgatggacctgcattt
gcagagaccgtgaaaaacatcttaaaacgtgaggaacattggaacgcatggaaaaatgaa
ggttgcccaccatttaaaagaccagcgtcggacatcatcgacggtgacgaagaaccacgt
aaacctaagagaccaaaacggagaatcggtgatgtaattagagatgcgcaagcagttggc
aaatatcacatgggaaacctagagcttactaaattatggaatctatgtcctaacaatctc
gaagcatgcaaatcaaaggatagagatttcctcccatctttagaaacatattttgaagat
gctattatggaactagatcctgctgcaatggttgatgacaagtacaaaaaagtgaatgat
ggtaattttggttggagagcattaagactgttagcaagacgaagccctcacttcttcgtt
catggaaattatcctataaataaattacctgaatatcttgagacaatgattaaaaaaatc
gccaaagatcgcccacaaacacaatctgacacaaaattagaaaccgaagaaacaccacca
tcagaatctaacgatcaggaatttaacgaagatgtcctgaagcaggatagtgaacaagat
tctgaaagtaccgatataaaagccagaaaattgaataaagttacaccagagatggtagga
aaattatcggaaaatctaaaaaatgattggaagaagctagctacgaaatttggttataca
aacgatgagattgcttttttcgaaagcaaaactacgccgtatgaacaatgcaagactatg
ctcgaaatatgggcagaagaggatgaggatgcgtcggttgagaatttagcttacatttta
gaaggtttaaaatatacagaagctttaacagtgctcaaatcttaa
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