Camponotus floridanus (Florida carpenter ant): 105257474
Help
Entry
105257474 CDS
T03919
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105257474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105257474
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105257474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_19
TPR_16
TPR_1
TPR_8
TPR_17
TPR_11
TPR_12
TPR_6
TPR_7
TPR_9
ANAPC3
PknG_TPR
BTAD
TPR_20
TPR_21
TPR_10
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
105257474
NCBI-ProteinID:
XP_011266415
UniProt:
E2AYS8
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MSDDIKVLLKDARESFKQNEYLETMKKCKKILKKDKNNYVALILLARAMQEIEEFKAQVV
LVLQKAVEVQPNNPLAWQGLVAYYEKVPQDNDNWKKLASAYCKLLQLDSDSSKFTYFINK
VSEIVLRIKDDEILFEVLDTLSVLRKISNKEKTSLIDKTLAWVLTEYPNSSITKYQEFYE
DILASVVKDTDLLNRQEYYRKYLKMLYDSNKFALLLTAAQDMHAQFPQDTCPLEWICCIY
YQEAILNEKDLNINITQIYESLLKLNANSEAALIAKAIYLKSMDKLINSRECLNQIISLN
SQLFYAWLVLSQIYYKLYCWEQTENASKQALQLMKPHLKDKLYHKVKLRLLEAMSRSNNK
QKLIQTQQMCEELLKTESSVQLQLIYARTNASLDKPDAIAVLSNLESQDEVKIQVLILKA
LYLKKHKQYEEAINILEIALNNSEAWLTFGKIYWDMGDYNHSLMAFLNGVQADRNNWECM
VYLGHYYREHGNDVERSRRCYHTALQINPNSEEAGIGLSTAYRLLKNTDANIHLLQRVTM
QQGTGAKWAWLQLGLQHLDQGDATEAIKALQHVIRADPNDNHSWESLADAYLVRGAHTSA
LKSYQRALQLSPGALYPMIQLANIKLLIGQHKEAKEDFENILENDKKYILALKGLAQACL
GLAKENIAKHFLCRARENLQQAVDNLTEAIMIRSDLSCNWKLLGDVCFRTAGLPEKYCYL
RIKSILMKFDSAEEYMKIRGNEILTLSIRCFCRALSTAENSSLLWHDLACCYLMQLDRDY
TVNKDDTAAKCLAAAKHAIRLCPQSWLHWNILGVICMSPYIKNYALAQHCFVMAIDQESN
NAIAWSNLATLYLHLGETHRANKAYSRAQRADPGYMNSWIGQGIIAENSEKVDPQERMDL
FRHSTQLGYHNEAALGYAHWVLTTLLDPIMKRDPLFVYVIENMHAIPAAADVLTWYTEYV
PNDVYALNTHGLLLERLRLYNTAVKQFVKALKLSQDEKRDMISINLARVLIQIGKHEEAI
ELCRQVKCGSFNSQCHLALSLFKAKQYEESYNTYEAALHWLADTETHKANILCAMAAIAY
IFQGADAVKTLLFQCIDIKPPIIAGFLAIVALGILHDDSNMTSLVLEELKPYIDDHEYGH
HVVTLFAYYQIIQGNLTEAIRIFSKAIFRHPNDIRYWIRLVRVSLLNTDLDIFRKCAQTA
LVLSRNTSMTDIVYVACASAYSHFGTTKGLRQAQKNIFTYPANVESWANFIATLLPRCTD
KDSKNNNQWISSLISVIKSQFQTSDYMSQWLHNIQKLIS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgatataaaggtcttgctgaaggacgctcgtgaatctttcaaacagaatgaa
tatctggagactatgaagaaatgcaaaaagattttaaagaaagataaaaacaattatgtg
gcattaattttgttagctcgtgctatgcaggaaatagaagaattcaaagcgcaggtagtc
ttagttcttcaaaaagctgtggaggtacaaccaaataatccattagcttggcaaggtcta
gtagcatattatgaaaaagtgcctcaagataatgacaactggaaaaagctggcttcagct
tattgcaaacttttacaattggatagtgactcttctaaatttacatattttatcaataaa
gtctcagaaattgtcctgagaatcaaagatgatgaaatattattcgaagtattagataca
ttgagtgtgttacgaaaaatttctaacaaagagaagacaagtctgattgataagactcta
gcatgggttttaacagaatatcctaatagtagtataaccaagtatcaggagttttatgaa
gatatactagcatctgtagtaaaagatacagatctattgaatagacaagaatattataga
aaatatttaaagatgttatatgactccaataaatttgctctcttattaacggcagctcag
gatatgcatgctcagttcccacaggatacttgtcctctagaatggatttgttgtatctat
tatcaagaggctatattaaatgaaaaagacctcaacattaatataactcagatttatgag
tctcttttaaaattgaatgcaaattctgaggctgcattaattgcaaaggcaatatatttg
aagagcatggataagctaatcaattctcgcgagtgtttaaatcaaataatttcattaaat
tcacaattattctatgcatggttagtattaagccaaatatattataaactttattgctgg
gaacaaactgagaatgcttccaaacaagcattacaattaatgaaacctcacttgaaagac
aaattgtaccataaagttaaattgagattacttgaagcaatgagtagaagtaacaacaaa
caaaagttgatacaaacacaacagatgtgcgaagagctgttaaaaaccgaatcttctgta
caattgcaattgatatatgcacggacaaatgcttcattggataaacctgatgctattgct
gtattaagcaacttagagtctcaagatgaagttaaaattcaagttcttatactaaaagca
ctatacctaaagaaacacaagcaatatgaagaagctattaatattcttgagatagcttta
aataattctgaagcttggttgacatttggtaaaatatactgggatatgggagattataat
catagtctgatggctttcttaaatggtgtccaagcagatcgtaataattgggaatgcatg
gtttatttgggacattattatcgcgaacatggcaatgatgtcgaacgttcgagaagatgt
taccacactgcattacaaatcaatccgaattctgaggaagctggcattggactgagtaca
gcttatcgacttctgaaaaacactgatgccaatatacatctattgcaaagagtaactatg
caacaaggtacaggagcgaaatgggcctggctccaattgggtctacaacatttagatcaa
ggcgatgcaactgaagctatcaaggcattacagcatgtaatcagagctgatcctaacgac
aatcatagctgggaatctctggcggatgcttatttagtgcgcggtgctcacacatcggca
ttgaaatcgtatcaacgtgcgttacagctgagtccaggagccttgtatcctatgatacaa
ctcgctaacatcaaactgctcattggtcagcataaagaagctaaagaggattttgagaat
atattagaaaacgataaaaaatatattcttgctttaaaaggtttagctcaagcatgttta
ggtctagcaaaagaaaatatcgcaaaacattttctatgtcgtgcaagagaaaatctacaa
caagcggtagataatttgacagaagctattatgatacgtagtgatctgtcctgcaattgg
aaattgcttggcgatgtctgttttagaacagccggtttgccagaaaagtattgctattta
agaatcaaatctattttaatgaaattcgatagtgccgaggagtatatgaaaattagagga
aatgaaatactcacgttatcaataagatgcttttgtcgagcgttgtcgaccgcggaaaat
tcttcattgttatggcacgatttagcatgctgttacttgatgcaattggaccgcgattat
acagtcaataaagacgatacagcagccaaatgtcttgctgctgcaaaacatgccatcaga
ctctgtccacagtcgtggttacactggaacattttgggtgttatttgcatgtcaccatat
ataaagaattatgctctggcccagcattgcttcgttatggcgattgatcaagaatcaaac
aatgcaatagcttggagcaatctggccacattgtacctacatctaggagagactcataga
gcgaataaagcatactctcgagcgcaacgtgcggatcccggttatatgaatagttggata
ggccaaggaataatcgcggaaaactcggagaaagtcgatccgcaggaaaggatggatctt
ttccgacattcaacacaattgggttatcacaacgaagcggctttaggctatgctcactgg
gtacttactactcttttagatcctataatgaagagagatccattatttgtttacgttatc
gaaaacatgcacgcgatacctgcagcagccgatgttctcacttggtatacagaatatgta
ccgaacgacgtttatgctctaaatactcacggtctgttgttggaacgactgagattgtat
aatacggcggttaagcaatttgtcaaagctttaaaactgagtcaggatgaaaaaagagac
atgatatccataaatttggcacgtgttttgattcaaatcggaaaacacgaggaagcgatc
gagttatgtagacaagtgaaatgtggaagtttcaattctcaatgccatttggcattatcg
ttatttaaagccaagcaatatgaagaatcgtacaatacgtatgaagcagctctacattgg
ctagcagacaccgaaacgcacaaagcgaatattttatgcgcgatggccgcgattgcttat
atttttcaaggagcggacgctgtcaagactctattgttccaatgcatagatataaaaccg
cccatcatagctggtttcttagctatcgttgctttaggaattttacatgatgattccaat
atgacctctttagtgttagaggaattgaaaccatacatagatgaccacgagtatggtcat
catgttgtcacattgttcgcatattatcaaattattcaaggaaatctcacggaagctatc
cgaattttctctaaagctatcttcagacatcctaatgacattaggtattggattcgtctc
gttagagtctcattgttgaatacagatttggacatctttcgtaaatgtgctcagacagca
ttggttttaagcagaaatacatccatgactgatattgtatatgttgcttgtgcctccgca
tatagtcatttcggtacgacaaagggtcttagacaggctcagaaaaatatatttacatat
ccggccaacgttgagagctgggctaattttattgctactcttctacctagatgtacagac
aaggattccaagaataataatcaatggatatcgtcattaatatctgtgataaaatcacaa
ttccaaacttctgactatatgtcacaatggcttcataatatacaaaaacttatttcttaa
DBGET
integrated database retrieval system
