Camelus ferus (Wild Bactrian camel): 102505704
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Entry
102505704 CDS
T02979
Symbol
LIG4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102505704 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfr03400
]
102505704 (LIG4)
Enzymes [BR:
cfr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102505704 (LIG4)
DNA repair and recombination proteins [BR:
cfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
102505704 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102505704
NCBI-ProteinID:
XP_006195242
UniProt:
S9XMP9
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All DBs
Position
14:28032027..28041397
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AA seq
844 aa
AA seq
DB search
MRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGARADAGDFAM
IAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSAKRKDLVKKSVLQLITQSSALEQKWLI
RMIVKDLKLGFSQKTIFSIFHNDAEELHSVTTDLEKVCRQLHDPLVGLSDISITLFSAFK
PMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYEDQFGASPQ
EGSLTPFIHSTFKPDVQNCILDGEMMAYNPHTQTFMQKGNKFDIKRMVEDSDLQTCYCVF
DVLMVNNKKLGHETLRNRHEILNSVFTPIPGRIEIVQKTQAQTKKEVVDALNEAIDKREE
GIMVKHPLSIYKPDKRGEGWLKIKPEYVDELMDKLDILIVGGYWGKGSRGGMMSHFLCAV
AEKPTSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILCGTEKPEV
YIEPCHSVIVQVKAAEIVPSDMYKTGCTLRFPRIEKIREDKEWHECTTLDELEQLRGQAS
GKLASKHLHIGGDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNISKVSNIFEDVEFCVM
SGTDGHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGAQNIRVKNIISSNKHDVVKPEWLL
ECFQTKRCVPWQPRVMIHMCPSTREHFAREYDCYGDSYFVDTDLNQLKEVFSGIKDPREQ
TPGEMAAVIADLEHRYSWDSSHLSMFRSHTVYLDLYTVINDLSTKIEGTRLAITALELRF
HGAKVVSCLAEGVSHVIVGEDRSRVADFKAFRRALKRKFKILQECWVTESIDKCELQEEN
QYLV
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagacttatccttcctcagctggaaagagagagaatggcctatggaatcaaagagact
atgcttgctaagctttacattgaactgcttaacctacccagagaaggaaaggacgccctt
aagctcctgaattacaggacgcctactggagctcgtgcagacgccggagacttcgcgatg
attgcgtactttgtgttgaagcccagatgtttgcagaaaggcagtttaaccatccagcaa
gtaaatgacattttagactccattgccagcaataattctgccaaaaggaaggacctggta
aagaagagtgttcttcagcttataactcagagttcagcacttgaacagaagtggctgata
cggatgattgtaaaggacctcaagcttggttttagtcagaagactatattttctattttt
cataatgatgcggaagagttgcacagtgtcaccacagatttggagaaagtctgtaggcag
ctgcatgaccctttggtcggactcagtgacatttctatcactttattctcagcctttaaa
ccaatgctggctgccatagcggatattgagcgaatcgagaaggacatgaaacaccagagt
ttctacatcgaaaccaagctagacggcgagcgcatgcagatgcacaaagacggggatgtg
taccagtacttctcgcgaaacgggtacaactacgaggaccagtttggtgcttccccacag
gaaggctctctgacgccgttcattcacagtacattcaagccagacgtgcagaactgtatc
ctggacggtgagatgatggcctacaaccctcatacgcaaacgtttatgcagaaggggaat
aagtttgatattaaacgaatggttgaagattctgatctgcaaacttgttactgtgttttt
gatgtgttgatggttaataataaaaagctaggacatgagaccctgagaaacaggcatgaa
attctgaatagtgttttcacaccaatcccaggtagaatagaaatagtgcagaagacacaa
gcccagactaagaaagaggtagttgatgctttgaatgaagcaatagataaaagagaagag
ggaatcatggtaaagcatcctctttctatttacaagccagacaaacgaggtgaaggatgg
ttaaaaattaaaccagagtatgttgatgaattgatggacaaactggacatcttgattgtc
ggaggctattggggtaaaggttcacggggtggaatgatgtctcattttttgtgtgctgtg
gcagagaagcccacttctggggaaaaaccatcagtgtttcatactctctgtcgtgttggc
tcaggttacaccatgaaagaactgtatgacctgggtttgaaattggccaaacactggaag
ccttttcacaagaaggctccgcccagcagcattttatgtggaacagagaagccagaggtg
tacattgaaccttgccactcggtcattgttcaggttaaggccgcagagatcgtccccagt
gacatgtataaaactggctgcacgttgcgttttccacgaattgaaaagataagagaagac
aaagagtggcatgagtgcacaaccctggatgagctggagcaacttcgggggcaagcatct
ggaaagctcgcatctaaacaccttcacataggtggtgatgacgaaccgcaagagaaaaag
cgcaaagctgcccccaaggttaagaaagtcattggaattatcgagcacctaaaagcacct
aacctctctaacataagcaaagtttctaatatatttgaagatgtggagttttgtgttatg
agtggaacagacggccacccaaagcctgatctggagaacagaattgcagaatttggtggt
tacatagtacagaatccaggcccagacacatactgcgtgatcgcaggggctcagaacatt
agagtgaaaaacataatttcttcaaataagcatgatgtcgtcaagcctgagtggctttta
gagtgtttccagaccaaacgctgtgtgccctggcagcctcgcgtcatgattcacatgtgc
ccatcaacaagagagcattttgcccgagagtatgactgctatggtgatagttactttgtt
gacacagatttgaatcaactgaaggaagtgttctcaggaattaaagatcctagggaacag
actcctggagagatggccgctgtgatcgccgacttagaacaccgctattcctgggacagc
tctcatctcagtatgtttcgaagccacactgtttatttggacttgtacactgttattaat
gacttaagtaccaaaatcgagggaacaagattagctataacagccttggagcttcgattt
catggagcaaaagtggtttcttgtttagccgagggcgtgtcacacgtaatcgttggggaa
gatcgtagtcgtgttgcagattttaaagcttttcgaagagctcttaagagaaagtttaaa
atcctacaagaatgttgggtaactgaatcaatagacaagtgtgaattacaggaggaaaat
caatatttggtttaa
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