Collimonas fungivorans: CFU_0905
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Entry
CFU_0905 CDS
T01583
Symbol
holC
Name
(GenBank) putative DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu03030
DNA replication
cfu03430
Mismatch repair
cfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFU_0905 (holC)
03430 Mismatch repair
CFU_0905 (holC)
03440 Homologous recombination
CFU_0905 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfu03032
]
CFU_0905 (holC)
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_0905 (holC)
Enzymes [BR:
cfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFU_0905 (holC)
DNA replication proteins [BR:
cfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFU_0905 (holC)
DNA repair and recombination proteins [BR:
cfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFU_0905 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AEK60737
UniProt:
G0AIF4
LinkDB
All DBs
Position
complement(1068383..1068808)
Genome browser
AA seq
141 aa
AA seq
DB search
MTQIDFHTNISDKFLYTCRLVRKARAAQRQIVILSSSAEDLATLDRALWTFSEHDFLPHV
RAGDPLAAQTPVILAADEETGWPHHQILINLSGKAPQHFARFERMFEIISLADDDKAGGR
DRYRFYQQRGYPLTHFVADNV
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaatcgactttcacaccaatatctcggacaagttcctgtacacctgccgactg
gtgcgtaaagcgcgcgcggcacaacgccagatcgtcatattaagcagcagcgccgaggat
ctggcgacgctcgaccgcgcgctctggaccttctcagagcacgactttctgcctcacgtc
agggccggcgacccgctggcggcgcaaaccccggtgatcctggccgccgacgaagaaacc
ggatggccgcatcaccagatcctgatcaacctgtccggcaaggcgccgcagcatttcgcc
cgcttcgaaagaatgttcgaaatcatctcgctggccgacgacgacaaggccggcggccgc
gatcgctaccgcttctaccagcaacgcggttaccccctgacccatttcgtcgccgacaac
gtatag
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