Clostridium gasigenes: J1C67_02600
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Entry
J1C67_02600 CDS
T07299
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cgas
Clostridium gasigenes
Pathway
cgas03420
Nucleotide excision repair
cgas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J1C67_02600
03430 Mismatch repair
J1C67_02600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgas03400
]
J1C67_02600
Enzymes [BR:
cgas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J1C67_02600
DNA repair and recombination proteins [BR:
cgas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J1C67_02600
MMR (mismatch excision repair)
Other MMR factors
J1C67_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
ResIII
AAA_12
DEAD
CarD_TRCF_RID
AAA_30
AAA_11
AAA_22
AAA_24
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QSW20113
LinkDB
All DBs
Position
CGAS001:complement(543241..545232)
Genome browser
AA seq
663 aa
AA seq
DB search
MEVKLDKYQKEAVYIKEKNVLVVAAPGSGKTTVIINRVNHLVIDLKVKIGNIIVITFTRA
AADNMRNRYKNLFNRDKSPFFGTFHGLFYKILLKEGYNIAIIEGGISHRIVKAVLAKYSD
EVSEDKIKEVLNNISTFKTSLMERGNFIPSISNDIFDECYEGYEGYKKKNQLWDFDDLSI
KVIELFQNNKSILKKYKDIFNYVLVDEFQDCDDIQVNFLKLINENNELFAVGDEDQCIYS
FRGSRPEYMVTFKELFPKGKKVYLSINYRSKQNIVENSKYVIENNENRNKKEIKAFNESD
GIIKYSKPYSETMQGEEIATIVKESYDNITENAVLYRTNMEARSIIDVFTKRKIEFILLD
KGYNFFEHFICKDILSYLRLAIDIKDKASFVHVINKPFRYISKSSLESVKSSFEDNNPFD
ILINKKDTPPFQAKKLNDLKKEIQYLNKLSLGSAIQYIISDLKYSEYLKNYGEKYNQSID
DLEDVLEEFKSAAEGLRTIIELFGHVENVKEQIEKSKGNKEGVILSTIHGVKGMEFKNVF
MINCAEETLPHKSSIEKNLEEERRLFYVGITRAINNLYLYSPKTIRGQFKESSRFIAEGN
FSKESEVDHYGLKIGDYIHHRTHGDGKVENIEGDKVRINFDVDIIRSFSLKVLMENNLII
IVS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaaattagataaatatcaaaaagaagctgtttatataaaagaaaagaatgta
ctggtagttgcagcgccaggttctggtaagactacagtaataataaatagggttaatcat
ttagttatagatttaaaggtgaaaataggtaatataatagttataacttttactagagct
gcagctgataatatgagaaatagatacaagaacttatttaatagagataagtcacctttt
tttgggacttttcatggattgttttataaaatacttttaaaggaaggatataatatagca
attattgaaggtggaatatcccatagaatagttaaagcagtactagcgaagtattcagat
gaagttagtgaagataaaataaaagaagttttaaacaatatttctacatttaaaacatct
cttatggaaagagggaactttataccgtccataagtaatgatattttcgatgaatgctat
gaagggtatgaaggatataagaaaaaaaatcaactttgggattttgatgatttatcaatt
aaagtaatagaattatttcaaaataataaaagtatcttaaaaaagtataaagatatattt
aactatgttttagttgatgagtttcaagattgtgatgatattcaagttaattttttaaag
ttgattaatgaaaataatgaactttttgcagttggagatgaggatcaatgtatttattca
tttagaggatcaaggccggaatacatggtaactttcaaagagttatttcctaagggcaaa
aaggtatatttatctataaattatagaagtaaacaaaatatagttgaaaattcaaagtat
gtaattgaaaataatgaaaatagaaataaaaaagaaattaaggcgtttaatgaaagtgat
gggataataaaatattcaaagccatacagcgaaactatgcaaggtgaagaaattgctacg
attgtgaaagaatcttatgataatataactgaaaatgcagtgttatatagaactaatatg
gaagctagaagcataatagatgtttttacaaaaagaaaaatagaatttattttattagat
aaaggatataatttctttgaacatttcatatgcaaagatattttaagctatcttagattg
gctattgatataaaagataaggctagctttgtacatgttataaataaaccatttagatat
ataagtaaaagcagtcttgaaagtgttaaatcaagttttgaagataataatccttttgat
attcttataaataaaaaagatactccaccttttcaagctaaaaagctaaatgatttaaaa
aaggaaattcaatatttaaataaactatctctaggatctgcaattcagtatataatttct
gatcttaaatatagtgagtatttaaaaaactacggtgaaaaatataatcaaagtatagat
gacttagaggatgttttagaggaatttaaaagtgcagcagaaggtcttagaacaataata
gaactatttggacatgttgaaaatgttaaggaacaaatagagaaaagtaagggtaataaa
gagggcgtaattctttcaactatacatggggtaaaaggaatggaatttaaaaatgtattt
atgataaattgcgcagaagaaacattgccacataaatcctcaatagaaaaaaatttagaa
gaggaaaggcgattgttctatgttggaattacaagagcaataaataacttatatctttat
tcgccaaaaacaataagaggacaatttaaagaatcatcaagatttatagcagaaggaaac
tttagcaaagaatcggaagtggatcattatggattgaaaatcggagattatattcatcat
agaactcatggtgatggaaaggtagaaaatattgaaggcgataaggttcgtataaacttt
gatgtagatattataagatctttttcattaaaggttttaatggaaaataatttaataata
attgtaagttaa
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