Cupriavidus gilardii: CR3_0131
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Entry
CR3_0131 CDS
T04050
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cgd
Cupriavidus gilardii
Pathway
cgd00300
Lysine biosynthesis
cgd00470
D-Amino acid metabolism
cgd01100
Metabolic pathways
cgd01110
Biosynthesis of secondary metabolites
cgd01120
Microbial metabolism in diverse environments
cgd01230
Biosynthesis of amino acids
Module
cgd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CR3_0131 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CR3_0131 (dapF)
Enzymes [BR:
cgd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CR3_0131 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALD89390
UniProt:
A0A0M3SUV1
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Position
1:complement(166812..167684)
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AA seq
290 aa
AA seq
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MKIQFTKMHGAGNDFVVLDGIHQTLNLSTEQWRALASRHFGVGADQILIVEKPTRPDVDF
RYRIFNADGGEVEHCGNGARCFVRFVTDHGLTDKRSVRVEVMNGVITLTLNDDGQVTVDM
GAPEFEPARIPFLPDGLPTRIEGDDTLYGIETNGRTVWISAVSMGNPHAVQVVEDTERFP
VREDGPVIEHHAAFPKRVNAGFMQVVDRNTIRLRVFERGSGETLACGTGACAAVVAGIRR
GLLDSPVRVHTHGGDLTIAWDGDGTPVRMTGPATTVFEGSIDLDALQPRG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccagttcaccaagatgcacggcgccggcaacgacttcgtcgtgctggacggc
atccaccagaccctgaacctgagcaccgagcagtggcgcgcgctcgccagccgccatttc
ggcgtcggtgcggaccagatcctgatcgtcgagaagccgacccggcccgacgtcgacttc
cgctaccggatcttcaatgccgacggcggcgaggtggagcactgcggcaatggcgcgcgc
tgcttcgttcgtttcgtcaccgaccacggcctgaccgacaagcgctcggtacgggtcgag
gtgatgaacggcgtcatcacgctgacgctgaacgacgacggccaggtcacggtcgacatg
ggcgcgcccgagttcgagccggcgcgcatcccgttcctgccggacggcctgccgacccgc
atcgagggcgacgacacgctgtacggcatcgagaccaatggccgcaccgtgtggatttcc
gcggtgtcgatgggcaacccccacgcggtgcaggtggtggaggacaccgagcgcttcccg
gtacgcgaggacggcccggtgatcgagcaccatgcggccttcccgaagcgcgtcaatgcc
ggcttcatgcaggtggtcgaccgcaatacgatccggctgcgcgtgttcgagcgcggctcc
ggcgagacgctggcctgcggcaccggcgcctgcgcggcggtggtcgccggcatccggcgc
ggcctgctcgactcgccggtcagggtgcatacgcacggcggcgacctgaccatcgcctgg
gatggcgacggcacgccggtgcggatgacgggcccggccaccacggtgttcgaaggttcg
atcgatctggacgcgctgcagccgcgcggctga
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