KEGG   Cupriavidus gilardii: CR3_0984
Entry
CR3_0984          CDS       T04050                                 
Symbol
ycfD
Name
(GenBank) cupin
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
cgd  Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:cgd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cgd03009]
    CR3_0984 (ycfD)
Enzymes [BR:cgd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     CR3_0984 (ycfD)
Ribosome biogenesis [BR:cgd03009]
 Prokaryotic type
  ribosomal protein modification factors
   CR3_0984 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_8 AraC_binding Cupin_2
Other DBs
NCBI-ProteinID: ALD90229
UniProt: A0A0M4KTE7
LinkDB
Position
1:complement(1170201..1171364)
AA seq 387 aa
MDPDAPLQLLGGMTPAAFMRDIWHRKPLLVRQAIPDIVPPVSREALFELADRDDVESRLV
THFRNRWKLAHGPFAADNLPSTKARQWTLLVQGVNLHNSAAAALMGQFRFIPDARLDDVM
VSYATDGGGVGPHFDSYDVFLLQVSGRRRWRISSQDRLDLVPDLPLKILAEFEAEQEFVL
EPGDMLYLPPQYAHDGIAEGECMTCSIGFRAPAYRELAGHFLAWLSETVEDNEALSGRYA
DPGQAATSRPAQLPADLARAVAQRLQALRWSNDMVSEFIGTHLSEPKPGVEFAEVPQIAA
GKYAKLARTHGIVLAPASIALYDRSHFFLNGEAYEVPGELAGWLRRLADRRHLTAAEVNQ
CADLPELMETFHHWTLEGWLQLAPAAM
NT seq 1164 nt   +upstreamnt  +downstreamnt
gtggatccggatgcgccacttcagctgctcgggggcatgacgcccgccgcattcatgcgt
gatatctggcaccgcaaacccctgctggttcgacaagccatccctgatatcgtgccccca
gtctcgcgggaagcgcttttcgagctggccgaccgcgacgacgtcgagtcgcggctggtc
acccacttccgcaaccgctggaaactggcgcacggcccctttgccgccgacaatctgcca
tcgaccaaggcgcgccaatggacgctgctggtccagggcgtgaacctccacaatagcgcg
gcggccgcgctgatggggcaattccgcttcattcccgatgcgcgcctggacgacgtgatg
gtcagctatgcgaccgacggcggcggtgtcggcccgcacttcgactcctatgatgtgttc
ctgctgcaagtttcgggccggcgccgctggcggatctcgtcgcaggaccggctcgacctg
gtgccggaccttcctttaaagatactggccgaattcgaagcggaacaggagttcgtgctc
gagcccggcgacatgctgtacctgccgccgcaatacgcccacgacggcatcgccgagggc
gagtgcatgacctgctcgatcggtttccgcgcgccggcctatcgcgagctggccgggcat
tttctggcgtggctgtcggaaaccgtggaggacaacgaggcgttgtccgggcgttatgcc
gatcccggtcaggcagccacgtcgcgccccgctcaactgccggcggatctcgcgcgcgcc
gtcgcgcaacggctgcaggcgttgcgctggtccaatgacatggtgtccgagtttatcggc
acccatctgtcggaaccgaagcccggcgtggagttcgccgaggttccgcaaatcgccgcg
ggaaaatacgcgaaactggccagaacgcacggcattgtgttggcgccggcttcgatcgcg
ctatacgaccgcagccatttcttcctcaatggcgaggcatacgaggtgccgggcgagctg
gccggctggctgcgccggctggccgatcggcgccatttgaccgcggccgaggtcaaccaa
tgcgccgacctgccggagctgatggagacctttcaccattggacgctggagggctggctg
cagctggcgccggctgcaatgtaa

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