Cupriavidus gilardii: CR3_1678
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Entry
CR3_1678 CDS
T04050
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cgd
Cupriavidus gilardii
Brite
KEGG Orthology (KO) [BR:
cgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgd03019
]
CR3_1678 (hrpA)
Enzymes [BR:
cgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CR3_1678 (hrpA)
Messenger RNA biogenesis [BR:
cgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CR3_1678 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
T2SSE
nSTAND3
NACHT
AAA_19
Ssl1
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
ALD90904
UniProt:
A0A0M3SVN9
LinkDB
All DBs
Position
1:complement(2038800..2042720)
Genome browser
AA seq
1306 aa
AA seq
DB search
MFANPLPPITFPEALPVSARRDEIARAIAQHQVVIVSGETGSGKTTQLPKICLSIGRGPA
RADAAGAEGNGEGNGEGKGEDQGKGKDGQPRRRGGLIGHTQPRRIAATSTAKRIAQELGS
PVGEHVGYQVRFNDTMSPGASIKLMTDGILLAETQTDPLLRAYDTIIIDEAHERSLNIDF
LLGYLKEILPRRPDLKVIITSATIDAQRFAEHFGSGGKPAPVIEVSGRLYPVEIRYRPIA
DEGSANQRGDKADKSDKGARAGDSPAKSAQARERDLYDGIVDAVDELSRLGPGDVLVFLP
GEREIREAAEALRKHHPPHTEILPLFARLSVQEQERVFKPSNARRIVLATNVAETSLTVP
GIRYVVDTGLARVKRYSYRNKVEQLQIEPISQAAANQRAGRCGRVADGVCIRLYDEADFA
ARPRFTDPEILRSSLAAVILRMKALRLGAIESFPFIEPPLGRAIADGYQLLQELGAVDEA
NALTPLGKQLARLPLDPRVARMILAARDQHCLREVLIIASALSVQDPRDRPQEAQEAADQ
AHRKFMDERSEFLGWVKLWKWFEDAVAHKKSNRQLQDQCRANFLSHLRLREWRDVHSQLL
TTVAEQGWKLNDSEPTYEQVHKALLTGLLGNIGQKLDEADGRGREYLGARGIKFHLWPGS
LVARKMGRWLMAAELVETSRLFARTLARIEPDWLEQVGRHLLKVSWSDPHWEKKAGQVLA
MERATLYGLTVYQHRRVHYGPMNPREARELFIRRALVEGEFDTRLPFYAHNQRLVREIEN
LEHKARRQDVLVDDELIYAFYDRHIPADIHQQTQFEQWYQKESARDRKLLYLNREELMRH
EAAGITTDLFPKTLNVAGVDMGLSYHFEPGSHRDGVTLTVPLYALNQVRPERADWLVPGM
IKEKVHLLLKSLPQKLRRHCVPLPDYAAGFVERRPFGEGELIDVLIADIREQTGTMIRRA
DFKLETLPAHHFMNFKVVDEHGRQLDMGRNLAQLRAELGGQAQQSFQSLVAREAPVAEAA
QYEGLTGWTFGELPELLEIRKGNRTLFGYPALVDRDTHCDVEVFDDPQEAERLHHAGLRR
LFALQLREQVKFVQKNIPGLSQMAMQYMTLGTQDMLRDQIVTLALERACMQAPLPRNEAE
FAARKEEGRGRLGLLAQEIARLAGTILAEYAALPRKLLQAKPFAAAHADMQAQLSQLMGK
HFLAETPYDRLVHFPRYLKGIAMRIDKLKGDPARDAQRQQEMAPLLQQWQRADRQRRQAR
GGEDARMEEFRWMLEELRIALFAQELRTPVPMSVKRLQKVWESMQR
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgccaatccgctgccgccgattacattccccgaagcgctgcccgtctcggcacgg
cgcgacgagatcgcgcgcgcgatcgcgcagcaccaggtggtgatcgtctcgggcgagacc
ggctcgggcaagaccacgcagctgcccaagatatgcctgtcgatcggccgcggcccggcg
cgtgccgatgccgccggcgccgaagggaacggcgaagggaacggcgaagggaagggcgaa
gaccagggcaagggcaaggacggccagccccggcgccgcggcggcctgatcggccatacc
cagccgcgccgcatcgccgcgacctcgaccgccaagcgcatcgcgcaggagctcggctcg
ccggtgggcgagcacgtcggctaccaggtgcgcttcaacgacacgatgtcgcccggcgcg
tcgatcaagctgatgaccgacggcatcctgctggccgagacgcagaccgatccgctgctg
cgcgcctacgacacgatcatcatcgacgaggcccacgagcgcagcctgaacatcgatttc
ctgctgggctatctgaaggagatcctgccgcgccgcccggacctgaaggtgatcatcacg
tcggcgacgatcgacgcgcagcgcttcgccgaacatttcggcagcggcggcaagccggcg
ccggtgatcgaggtcagcgggcggctgtatccggtcgagatccgctatcgcccgatcgcc
gacgaaggcagcgcgaaccagcggggcgacaaggccgacaagagcgacaagggcgccagg
gccggcgatagcccggcgaagtcggcgcaggcgcgcgagcgcgacctgtacgacggcatc
gtcgacgcggtcgacgagctgagccggctcggccccggcgacgtgctggtgttcctgccc
ggcgagcgcgagattcgcgaggccgccgaggcgctgcgcaagcaccatccgccgcacacc
gagatcctgccgctgttcgcgcggctgtcggtgcaggagcaggagcgcgtgttcaagccg
tcgaacgcgcgccgcatcgtgctggccaccaacgtcgccgagacctcgctgacggtgccc
ggcatccgctatgtggtcgacacgggcctggcgcgcgtcaagcgctattcgtatcgcaac
aaggtcgagcagctgcagatcgagccgatctcgcaggcggccgccaaccagcgcgccggc
cgctgcggccgcgtcgccgacggcgtctgcatccgcctgtacgacgaggccgatttcgcc
gcgcgcccgcgcttcaccgatcccgagatcctgcgctcgtcgctggccgcggtgatcctg
cggatgaaggcgctgcgcctcggggcgatcgagtccttcccgttcatcgagccgccgctg
ggccgcgcgatcgccgacggctatcagctgctgcaggagctgggcgccgtcgacgaggcc
aatgcgctgacgccgctgggcaagcagctggcgcgcctgccgctggacccgcgcgtggcc
cggatgatcctggccgcgcgcgaccagcattgcctgcgcgaggtgctgatcatcgccagc
gcgctgtccgtgcaggatccgcgcgaccgtccgcaggaggcgcaggaggccgccgaccag
gcgcaccgcaagttcatggacgaacgctcggaattcctcggctgggtcaagctgtggaag
tggttcgaggacgcggtcgcgcacaagaagagcaatcgccagctgcaggaccagtgccgc
gccaacttcctgtcgcatctgcggctgcgcgaatggcgcgacgtccattcgcagctgctg
accacggtcgccgagcagggctggaagctcaatgacagcgagccgacctacgagcaggtc
cacaaggcgctgctgaccggtctgctcggcaatatcggccagaagctggacgaggccgac
ggccgcggccgcgagtacctgggcgcgcgcggcatcaagttccatctgtggcccggctcg
ctggtggcgcgcaagatgggccgctggctgatggccgccgagctggtcgagaccagccgg
ctgtttgcccgcacgctggcgcgcatcgagcctgactggctcgagcaggtcggccgccat
ctgctgaaggtcagctggagcgatccgcactgggagaagaaggccggccaggtgctggcg
atggagcgcgccacgctgtatggcctgacggtctaccagcaccggcgcgtgcactacggc
ccgatgaacccccgggaagcgcgcgagctgttcatccgccgcgcgctggtcgaaggcgaa
ttcgatacgcggctgccgttctacgcgcacaaccagcggctggtgcgcgagatcgagaac
ctcgagcacaaggcgcgccggcaggacgtgctggtcgacgacgagctgatctacgccttc
tacgatcgccatatcccggccgacatccatcagcagacccagttcgagcagtggtaccag
aaggagagcgcgcgcgaccgcaagctgctgtacctgaaccgcgaagagctgatgcggcac
gaggcggccggcatcaccaccgacctgttcccgaagacgctgaacgtcgccggcgtcgac
atgggtttgagctaccacttcgagcccggcagccatcgcgacggcgtcacgctgacggtg
ccgctgtacgcgctgaaccaggtccggcccgagcgcgccgactggctggtgcccggcatg
atcaaggagaaggtgcacctgctgctcaagtcgctgccgcagaagctgcgccgccattgc
gtgccgctgcccgactatgcggcgggcttcgtcgagcgccggccgtttggcgagggcgag
ctgatcgacgtgctgatcgccgatatccgcgagcagaccggcacgatgatccggcgcgcg
gacttcaagctggagacgctgccggcccaccacttcatgaacttcaaggtggtcgacgag
cacggccgccagctcgacatgggccgcaacctggcgcagctgcgcgcggaactgggcggg
caggcgcagcagtcgttccagagcctggtcgcgcgcgaggcgccggtggccgaggccgcg
cagtatgaggggctgaccgggtggaccttcggcgagctgcccgagctgctggaaatccgc
aagggcaaccgcacgctgttcggctatccggcgctggtcgaccgcgacacccactgcgac
gtcgaggtgttcgacgacccgcaggaggccgagcgcctgcaccacgccgggctgcggcgg
ctgttcgcgctgcagctgcgcgagcaggtcaagttcgtgcagaagaacatccccgggctg
tcgcagatggcgatgcagtacatgacgctgggcacgcaggacatgctgcgcgaccagatc
gtgacgctggcgctggagcgtgcctgcatgcaggcgccgctgccgcgcaacgaggccgag
ttcgccgcgcgcaaggaggagggccgcgggcggctcggcctgctggcgcaggagatcgcc
cggctggccggcaccatcctggccgagtacgcggcgctgccgcgcaagctgctgcaggcc
aagcccttcgccgccgcccatgccgacatgcaggcgcagctgtcgcagttgatgggcaag
catttcctggccgagaccccgtacgacaggctggtgcatttcccgcgctatctgaagggc
atcgcgatgcggatcgacaagctcaagggcgatccggcccgggatgcgcagcggcagcag
gaaatggcgccgctgctgcagcagtggcagcgcgccgacaggcagcggcggcaggccagg
ggcggcgaggacgcgcggatggaggaattccgctggatgctggaggagctgcgcatcgcg
ctgttcgcgcaggaattgcgaaccccggtgccgatgtctgtcaagcgcctgcagaaggtg
tgggagtcgatgcaacggtag
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integrated database retrieval system
