Cricetulus griseus (Chinese hamster): 100682536
Help
Entry
100682536 CDS
T02813
Symbol
Abcb1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge02010
ABC transporters
cge04976
Bile secretion
cge05206
MicroRNAs in cancer
cge05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100682536 (Abcb1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
100682536 (Abcb1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100682536 (Abcb1)
09162 Cancer: specific types
05226 Gastric cancer
100682536 (Abcb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cge02000
]
100682536 (Abcb1)
04147 Exosome [BR:
cge04147
]
100682536 (Abcb1)
04090 CD molecules [BR:
cge04090
]
100682536 (Abcb1)
Enzymes [BR:
cge01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100682536 (Abcb1)
Transporters [BR:
cge02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100682536 (Abcb1)
Exosome [BR:
cge04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100682536 (Abcb1)
CD molecules [BR:
cge04090
]
Proteins
100682536 (Abcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
Zeta_toxin
RsgA_GTPase
AAA_5
AAA
AAA_14
AAA_29
AAA_28
G-alpha
AAA_7
APS_kinase
AAA_15
DUF815
AAA_30
nSTAND1
NTPase_1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100682536
NCBI-ProteinID:
NP_001230917
UniProt:
P21448
Structure
PDB
LinkDB
All DBs
AA seq
1276 aa
AA seq
DB search
MEFEEDFSGRKDKNFLKMGRKSKKEKKEKKPVVSVFTMFRYAGWLDRLYMLVGTLAAIIH
GVALPLMMLVFGDMTDSFASVGNIPTNATNNATQVNASDIFGKLEEEMTTYAYYYTGIGA
GVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKIN
EGIGDKIGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKE
LQAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAF
LLIYASYALAFWYGTSLVISKEYSIGQVLTVFFAVLIGAFSIGQASPNIEAFANARGAAY
EIFNIIDNKPSIDSFSKNGYKPDNIKGNLEFKNIHFSYPSRKDVQILKGLNLKVQSGQTV
ALVGNSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPVLFATT
IAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIAR
ALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADIIAGFDG
GVIVEQGNHEELMREKGIYFKLVMTQTAGNEIELGNEVGESKNEIDNLDMSSKDSASSLI
RRRSTRRSIRGPHDQDRKLSTKEALDEDVPPISFWRILKLNSSEWPYFVVGIFCAIVNGA
LQPAFSIIFSKVVGVFTRNTDDETKRHDSNLFSLLFLILGVISFITFFLQGFTFGKAGEI
LTKRLRYMVFKSMLRQDVSWFDNPKNTTGALTTRLANDAGQVKGATGARLAVITQNIANL
GTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIEN
FRTVVSLTREQKFENMYAQSLQIPYRNALKKAHVFGITFSFTQAMMYFSYAACFRFGAYL
VARELMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHIIMIIEKVPSIDSYST
GGLKPNTLEGNVKFNEVVFNYPTRPDIPVLQGLNLEVKKGQTLALVGSSGCGKSTVVQLL
ERFYDPMAGTVFLDGKEVNQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQD
EIERAAKEANIHQFIESLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEAT
SALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ
KGIYFSMVSVQAGAKR
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgaagaggactttagcggaagaaaagacaagaacttcttgaagatgggcaga
aagagtaaaaaggagaagaaagagaagaaaccagtggtcagtgtgtttacaatgtttcgc
tacgcaggttggctggataggttgtacatgctggtggggactctcgcagctattatccat
ggagttgcactcccgcttatgatgctggtgtttggagacatgacagacagctttgcaagt
gtaggaaacatcccaacaaatgctactaataatgccactcaagtcaatgcttcagacatc
tttggcaaactggaggaagaaatgaccacgtacgcctattactacacagggattggtgct
ggtgtgcttatagttgcctacattcaggtttcattttggtgcctggcagctggaagacaa
atacacaaaattagacagaagttttttcatgctataatgaatcaggagataggctggttt
gacgtgcacgacgttggggagctcaacacccggctcacagatgatgtctccaaaattaac
gaaggaattggtgacaaaattggaatgttctttcaggcaatggcaacattttttggtggt
tttataataggatttactcgaggctggaagctaacccttgtgattttggccatcagccct
gttcttggactgtcagctggtatttgggcaaagatattatcttcatttactgataaagaa
cttcaggcatatgcaaaagctggagcagttgctgaagaagtcttagcagccatcagaact
gtgattgcatttggaggacaaaagaaagaacttgaaaggtacaacaacaatttagaagaa
gccaaaagacttgggataaagaaagcgatcacagccaacatttccatgggcgcagctttc
cttcttatctatgcatcatatgctctggccttctggtatggaacgtccttggtcatctca
aaagaatattctattggacaagtgctcactgtcttctttgctgtattaattggggcattc
agtattggacaggcatctccaaatatcgaagcctttgccaatgcaagaggagcagcctat
gaaatcttcaacataattgataataagcccagtattgacagcttctcaaagaatgggtac
aaaccagacaacattaaaggaaatttggaattcaaaaatattcacttcagttacccatct
cgaaaagacgttcagatcttgaagggcctcaacctgaaggtgcagagcggacagacagtg
gccctggttggcaacagtggctgtgggaaaagcaccactgtccagctgctgcagaggctc
tacgaccccacagagggcgtggtcagtatcgacggtcaggacatcaggaccatcaatgtg
aggtatctgcgggaaatcattggggtcgtgagtcaggaacctgtgttgtttgccaccact
atcgctgaaaacattcgctatggccgagaaaatgtcactatggacgagatcgagaaagct
gtcaaggaagccaatgcctatgacttcatcatgaaactgccccataaatttgacactctt
gttggtgagagaggagcacagctgagtggaggacagaaacagagaatcgccattgctcgt
gccctggtccgcaaccccaagatccttttgttggatgaggcgacatcagccttggacaca
gaaagtgaagccgtggttcaggctgctctggataaggctagagaaggccggactaccatt
gtgatagcccaccgcttgtctacagttcgaaatgctgacatcatagctgggtttgatggt
ggtgtcattgtggagcaaggaaatcatgaagagctcatgagagagaagggcatttacttc
aaacttgtcatgacacagacagcaggaaatgaaattgaattaggaaatgaagttggtgag
tctaaaaatgaaattgataatttagacatgtcttcaaaagattcagcatccagtctaatc
agaaggagatcaactcgcagaagtatccgtggaccacatgaccaagacaggaagcttagt
accaaagaggccttggatgaagatgtacctccaatttccttttggcgtatcctaaagttg
aattcatctgaatggccatattttgtggttggtatattctgtgccatagtaaatggagcc
ttgcaaccagcattctcaataatattttctaaggttgtaggggttttcacaagaaatact
gatgatgaaaccaaacgacatgatagcaacttgttttccttattgtttctgatccttggg
gtcatttcttttattacattttttcttcagggcttcacatttggcaaagctggagagatc
ctcaccaagcgactccgatacatggttttcaaatccatgctgagacaggatgtgagctgg
tttgataaccctaaaaacaccactggagcattgaccaccaggctcgccaacgatgctggt
caagttaaaggggctacaggagccagacttgctgtcattacccagaatatagcaaatctt
gggacaggaatcatcatatccctaatctatggctggcagttgacacttctactcttagca
attgtccccatcattgcaatagcaggagtggttgagatgaaaatgttgtctggacaagca
ctaaaagataagaaggagctagaaggttctgggaagattgctactgaagcaatagagaac
ttccgcactgtcgtctctttgactcgggagcagaagtttgaaaatatgtatgcccagagc
ttgcagataccatacagaaatgctctgaagaaagcacacgtctttgggatcacattctcc
ttcacccaggccatgatgtatttttcgtatgctgcttgtttccggtttggtgcttacttg
gtggcacgggaattaatgacatttgaaaatgttctattagtattctcagctattgtcttt
ggtgccatggcagttgggcaggtcagttcatttgctcctgactatgccaaagccaaagtg
tcggcatcgcatatcatcatgatcattgaaaaagtcccttccattgacagctacagcacc
ggaggcctgaagcctaatacattggaaggaaatgtgaaatttaatgaagtcgtgttcaac
taccccacccggcctgacatcccagtgcttcaggggctgaacctggaggtgaagaagggc
cagacgctggccctggtgggcagcagtggctgcgggaagagcacagtggtccagctgctc
gagcggttctacgaccccatggccggaacagtgtttctagatggcaaagaagtaaaccaa
ctaaatgtccagtggctccgagcacacctaggcattgtgtcccaagagcccatcctgttt
gactgcagcatcgctgagaacatcgcttatggagacaacagccgggtcgtgtcccaggat
gagatcgagagggcggcgaaggaagccaacatccaccagttcattgagtcactgcctgac
aaatacaacaccagagtaggagacaaagggactcagctgtcgggtgggcagaaacaacgc
atcgccatagcacgcgccctcgtcagacagcctcacattttgctcctggatgaagcaaca
tcagccctggatacagagagtgaaaaggttgtccaggaagctctggacaaagccagagaa
ggccgcacctgcattgtgatcgctcaccgcctgtccaccatccagaacgcagacttgatc
gtggtgattcagaatggcaaggtcaaggagcatggcacccaccagcagctgctggcacag
aaaggcatctatttctccatggtcagtgtgcaggctggagcaaagcgctag
DBGET
integrated database retrieval system
