Cricetulus griseus (Chinese hamster): 100767365 Help Entry 100767365         CDS       T02813                                  Symbol Lig1 Name (RefSeq) DNA ligase 1 isoform X2   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism cge  Cricetulus griseus (Chinese hamster) Pathway cge03030   DNA replication cge03410   Base excision repair cge03420   Nucleotide excision repair cge03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cge00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     100767365 (Lig1)    03410 Base excision repair     100767365 (Lig1)    03420 Nucleotide excision repair     100767365 (Lig1)    03430 Mismatch repair     100767365 (Lig1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cge03032]     100767365 (Lig1)    03400 DNA repair and recombination proteins [BR:cge03400]     100767365 (Lig1) Enzymes [BR:cge01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      100767365 (Lig1)     6.5.1.6  DNA ligase (ATP or NAD+)      100767365 (Lig1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      100767365 (Lig1) DNA replication proteins [BR:cge03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     100767365 (Lig1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      100767365 (Lig1) DNA repair and recombination proteins [BR:cge03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      100767365 (Lig1)    NER (nucleotide excision repair)     Other NER factors      100767365 (Lig1)    MMR (mismatch excision repair)     Other MMR factors      100767365 (Lig1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR PucR Motif Other DBs NCBI-GeneID:  100767365 NCBI-ProteinID:  XP_027287107 UniProt:  A0A9J7K016 LinkDB All DBs Position 9:complement(26542933..26576844) Genome browser AA seq 931 aa AA seqDB search MRKKEPERKGENSAATMQKSIRSFFQPMKEGKAQKPEKETANSTKEKEPPPKVALKERNR AVPESDSPVKRPGRKAAQVLSSEGEEEDEAPSTPKVQKSVSDSKQSSPPSPDACPENSPF HSSPSMEISPSGFPKRRTARKQLPKRTIEDTVEEQNEDKGRAAKKRKKEEEAQTPMESLT ESEDVKPKEEKEEGKHAEASKSPESGTLTKTETIPVCKAGVKQKPQEEEQSKPPARGAKT LSSFFTPRKPAEKAIVKQEEPGTPGKEETKGALDPTNYNPSKRNYHPIEDACWKHGQKVP FLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELG VGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPPPPLTTSGVFTKF CDIARLTGSASMAKKLDAIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALALAVS LTPPGQEFPPAVVDAGKGKTTEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERL PEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKIFS RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA SEIQVQVCLYAFDLIYLNGESLIRQPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIA EFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGR GKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSLKALVLPTPRPYVRIDG AVAPDHWLDPKVVWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVREDKQPEQAT TSDQVACLYRKQSQIQNQHNSDLDSDFEDCY NT seq 2796 nt NT seq  +upstreamnt  +downstreamnt atgagaaaaaaagaaccagagaggaaaggggagaactctgctgccaccatgcagaaaagt atcaggtcatttttccaacccatgaaagagggtaaagcacagaagccggagaaggagaca gctaacagcaccaaagagaaggagccacctccaaaggtggcactgaaggagaggaatcga gcagtgcctgagagtgattctccagtgaagaggcctggaaggaaggcagcccaggtccta agcagcgaaggggaggaggaagatgaagcccccagcacccctaaagtccagaagtctgtg tcagactccaaacaaagctctcctcccagccctgacgcatgtcctgagaacagtcctttc cacagtagcccctccatggagatctccccatcaggattcccgaagcgtcgcactgctcgg aagcagctcccgaaacggacaattgaggacactgtggaggagcagaatgaggacaaaggc agagcagccaagaaaaggaagaaggaagaagaagcacagactccaatggaaagcctcaca gagagtgaagatgtaaaacccaaggaagaaaaggaggagggcaagcatgctgaggcttcc aagtcccctgagtcgggaaccttgacaaagacagagaccatcccagtgtgtaaggccggc gtgaaacagaagcctcaggaagaggagcagagcaagcctcctgccagaggcgccaagaca ctcagcagcttcttcactccccggaagccagcagagaaagccatagtgaaacaagaagag ccaggtactccagggaaggaagagaccaagggagccctggatccaacaaattacaatcct tccaagagaaactaccaccccattgaagatgcctgctggaaacatggccagaaagtccct tttctcgctgtggcccggacctttgagaagattgaggaggtttctgctcggctcaagatg gtggagacactgagcaacttgctgcgctcggtggtggccctgtcacctccagacctgctt cccgttctttacctcagcctcaaccgccttgggccacctcagcagggactagagctgggt gttggtgatggcgtcctccttaaggcagttgcccaggccacaggccgtcagctggagtcc atccgggctgaggtggctgagaagggtgacgtgggactggtggccgagaacagccgcagc actcagagactcatgctgccccctcctccgctcaccacctccggggtctttaccaaattc tgtgacattgcccggctcactggcagtgcttccatggccaagaagttggatgccatcaag ggcctgtttgttgcctgccgtcactcggaagcccggttcattgccaggtccctaagtgga cgcctgcgcctcgggctggctgagcagtccgtcttggctgcccttgccctggctgtgagc ctcacaccccctggccaagaatttcccccagctgttgtggatgctgggaagggcaagacc acagaggccagaaagacatggttggaagaacaaggcatgatcttgaagcagaccttctgt gaggtacctgacctggaccgaatcatcccggtgctgctggaacatggcctggaacgcctc ccagagcactgcaggctgagcccaggggtccctcttaaaccaatgctggctcatcccact cggggtgtcagcgaggtactgaaacgctttgaggaggtggactttacctgcgagtacaaa tatgacgggcagcgggcccagattcatgttctggaaggtggagaggtgaagatcttcagt aggaaccaggaagacaacacaggaaagtacccggacatcatcagccgcatccccaagatt aaactcccctcggtcacgtcctttatcctggacactgaggctgtggcctgggaccgggaa aagaagcagatccagccattccaagtgctcaccacacgcaagcgcaaggaggttgacgcc tcggagatacaggtgcaggtgtgtctgtatgcctttgatctcatctacctcaatggagag tccctgattcgccagcccctgtctcgacgtcggcagctgctccgggagaactttgtggag acagagggtgagtttgtcttcgccacctccctggacaccaaggacatcgagcagatcgct gagttcttggagcagtcggtgaaggactcctgtgagggactgatggtgaagaccctggat gttgatgccacctatgagatcgccaagaggtctcacaactggctcaagctaaagaaggac taccttgacggtgtgggcgacactctggaccttgtggtgattggcgcctacctgggccgg gggaagcgtgccggccggtatgggggcttcctcttggctgcctatgatgaggagagtgaa gagctgcaggccatatgcaagctgggaactggattcagtgatgaagagctggaggagcat caccagagcctaaaggccctagtgttgccgaccccacgcccctatgtgaggatcgatggg gcagttgccccagaccactggctggacccaaaggtcgtatgggaggtgaagtgtgcggat ctctccctgtcccctatctaccctgctgcgcggggcctggtggacaaagagaaagggatc tcccttcgtttccctcggttcattcgtgtccgtgaagacaagcagccagagcaggccacc accagtgaccaggtggcctgtttgtaccggaagcagagtcagatacagaaccagcacaac tcagacttggactccgactttgaggactgctattaa

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