Clostridium gelidum: psyc5s11_51990
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Entry
psyc5s11_51990 CDS
T08447
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
cgel
Clostridium gelidum
Pathway
cgel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
psyc5s11_51990 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgel03400
]
psyc5s11_51990 (uvrB)
DNA repair and recombination proteins [BR:
cgel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
psyc5s11_51990 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
psyc5s11_51990 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Microtub_bd
AAA_22
Kinesin
DUF87
CFAP141
AAA_7
UB2H
Motif
Other DBs
NCBI-ProteinID:
BCZ49132
LinkDB
All DBs
Position
complement(5661922..5663889)
Genome browser
AA seq
655 aa
AA seq
DB search
MGEFKIHSKFKPTGDQPQAIDKLVESIKHNNRCQTLLGVTGSGKTFTMANIIEKLQRPTI
ILAHNKTLAGQLCSEFKEFFPDNIVEYFVSYYDYYQPEAYKPSTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPEEYKKLTISLRTGMEKERNKVIKELIDIQY
ERNDIDFSRGTFRVRGDSLDIIPASYSNKGIRIEFFGDEIERIREFDVLTGTILGERNHV
AITPASHFATSRETVEKSIGLIEGELEERLRELNAQDKLLEAQRLRQRTNFDIEMIKEMG
YCSGIENYSRLLDGRASGTPPKTLIDYFPEDFLMFIDESHVTLPQVRAMYAGDRSRKNTL
IDYGFRLPCAYDNRPLKFEEFEKKIKQVVFVSATPAAYEIDNSEVIAEQIIRPTGLLDPP
IIIRPIKGQIDDLYGEINKVKECGFRTLITTLTKRMAEDLTKYLTELGVKAAYMHSEILT
MERMKIIRDLRLGEYDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESKVIMYADNITKSMDKALKETERRRAIQKEYNSKNGMIPTTIIKDVREIIEATKI
AEEVAEYKVDGNKKFTKKEKDKLIKEYTQEMLLAAKNLQFERAAELRDIINEIKN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatttaaaatacattctaagtttaagcctacaggagaccagccacaagctatt
gataagttagtggaatcaataaaacataataatagatgtcaaactttacttggagtaact
ggttcgggaaaaacatttactatggcaaatattatagaaaaattacaaaggcctactata
attctagctcataataaaactttagcaggacagttatgctcagaatttaaagagtttttt
cctgataacatagtagaatattttgtatcttattatgattattatcaaccagaagcatac
aaaccttcaacagatacatttattgaaaaagatgcatctataaatgatgaaatagataaa
ttaagacattcagctacttcagctctctttgaaagaagggatgtaataattgttgcatct
gtttcttgtatatatggattaggtaatccagaagaatataaaaaacttacaataagcctc
agaactggaatggaaaaggaaagaaataaagttataaaggaacttatagacattcaatat
gaaagaaatgatatagacttttcaagaggaacttttagagttcgaggagattctttagat
ataattccagcatcatattcaaataaggggattagaatcgaattttttggagatgaaatt
gagagaataagagaatttgatgtattaacaggaactattcttggtgaaagaaatcatgta
gcaataactcctgcatctcactttgcaacttcaagagaaactgttgaaaaatcaattgga
cttattgaaggggaattagaagaaagactaagagaacttaatgctcaagataaactttta
gaagctcaaagattaagacaaagaactaattttgatattgaaatgataaaagaaatggga
tattgcagtggcatagagaattattcaagattattagatgggagggcttctggaacacca
cctaaaactttaatagattattttccagaagatttcttaatgtttattgatgaaagtcat
gtaacattaccacaagttagagcaatgtatgcaggcgataggtctagaaaaaacacttta
attgattatggatttagactcccctgtgcatatgataacagaccgttaaagtttgaagaa
tttgaaaagaaaattaagcaagtggtttttgtaagtgcaactccagctgcttatgaaata
gataattcagaagtaattgcagaacaaattataagacctacaggattattagatcctcca
ataattataagaccaataaaagggcaaatagatgatttatatggagaaattaataaagtt
aaagaatgtgggtttagaacattaataacaacactgactaaacgtatggcggaagattta
accaaatacttaacagagcttggggttaaggctgcttatatgcattcagagattcttact
atggagagaatgaaaattataagggatttaagacttggagaatatgatgtattagtagga
ataaatcttttaagagagggtttagatataccagaagttgctttagttgcaattttggat
gctgataaagaaggatttttaagatcagaaacatcgcttatacaaactataggaagagca
gctagaaattcagaaagtaaagttataatgtatgcagataatataacaaaatctatggat
aaagctctaaaggaaactgaaagaagaagagctatacaaaaagaatataacagcaaaaat
ggaatgatcccaacaactataattaaagatgtcagagagattatagaagctaccaaaatt
gctgaagaagtggcagaatataaagtggatggaaataaaaaatttactaagaaagaaaag
gataagttaattaaagaatatacacaagaaatgctattggctgcaaagaatctacaattt
gagagagctgccgaacttagagatataattaatgaaattaagaattaa
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