KEGG   Cryptococcus gattii: CGB_H2260W
Entry
CGB_H2260W        CDS       T02232                                 
Name
(RefSeq) RNA helicase
  KO
K18664  antiviral helicase SLH1 [EC:5.6.2.6]
Organism
cgi  Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_H2260W
Enzymes [BR:cgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CGB_H2260W
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     CGB_H2260W
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_11 AAA_19 UvrD-helicase His_biosynth
Other DBs
NCBI-GeneID: 10189533
NCBI-ProteinID: XP_003195672
UniProt: E6RAN8
LinkDB
Position
H:join(500832..500929,500986..501165,501222..501405,501459..501665,501717..501860,501889..501996,502047..502125,502176..502189,502244..502660,502719..502801,502851..502989,503039..503329,503385..503621,503676..503692,503743..503846,503898..503927,503985..504179,504234..504298,504359..504442,504506..504616,504667..505508,505562..507185)
AA seq 1750 aa
MSVQHYLGTLFQPQPPTLEDSWKAVISSWGSSQFRAQAVDDVEPVLDTSPWPSVLEYLSI
TGLPSVNLEPPPIESAPESSLSTRADVVDRLRQHIPTTFGSLVNLLSTPRSNDDIQSELI
EIMGFEGDALSLIEELLKPGARQNVVDSCLRSTPSEQDKNEARPVQTDKPAYLPNARMTV
KKKVKDKKKVIDISDIVGSAEDINRRLQEQIEGPKAMFSEDGPKMIEQEILPHVYTATGN
KFVSLSQGGKFALPEGTKREYSDVGRPFPLTTYEEVIIPPANPVPPTKTERPVKIAELSS
MAGGCFPKYIQLNRMQSIVQPTAMNTNENMLICAPTGAGKTDVAIMAIIRVLSQHVIDGP
TSHPSGFNINRNAFKIIYVAPMKALASEIVSKFAKRLAWLSIKVRELTGDMQLTKQEIEE
TQIIVTTPEKWDVVTRKPTGEGELASKVKLLIVDEVHLLAEDRGAVIETIVARTLRQVES
SQSLIRIVGLSATLPNYVDVGDFLRVNRHQGLFYFDASFRPIPLEQHFIGVSGKPRSTVS
ARNMDRVVFEKVSELVEAGHQVMVFVHARRDTVKTAQTLKEMALEEGVSTFFQTDGHAKF
SQYRAEISKSRNKEMKELFDAGFGIHHAGMLRTDRNMMEKMFGDGCINVLCCTSTLAWGV
NLPAHAVIIKGTQVYDTGKGSFMDLSVLDVLQIFGRAGRPGYATSGVGFICTTHDKVDHY
VTAVMSQTPIESKFIPGMTDALNAEVALGTITNVQEAMQWLSYTYLFVRMKKNPWVYAMA
HDVTKDDPQLGNKRNELIVQAARLLQKARMVRYDDLANTFGITDLGRIAAKYYLRFSTIE
IFNSKFNPRMSNADLFQMLCEATEFEQIQLRDSEVEELEAIIGSGVIPLEVAGGAINKRS
KVNILLQAHISNVYINDFALVSDAAFVAQNAGRIIRALLEIALSRNWANCSYLLVELSKC
IERRQWVYDHGLAQLKVLQRETIHKLTQYTPDSMTISDFRDMTAQENGEFIHMNEKHGQA
VLDAAMMFPTVNLTHTLRPITHDLLQITVKVTPQFKWHSKISGSSEPFYVWVQDEEGLNI
YQWRNVRITPSTSAIIIDFFLPFDDVPPDSISIISISDKWLWSYEQLVIQLSDLIMPPPP
KESTQILSVPFLRRSCFNDPQLEQRYAHTLDTLNTVQSHAFWMLYNTSMNAVISAPVGSG
KTLLAEGAVWNTFRHNKESVVLIIVPERYAVHEAVARLRSLCPPKRRVVIKTLFNVSDFE
QLLSGGPAIGVTTPFAILSNDKIDNFLNTQRLGLYVFEDLHRLDEVYELAVSKILTFART
ARTRIVGTTSSLNDPSDLAEWLGVDPGPLDQWGKPVASQPPALFSFAPSDRDNHISVSIK
SFTIPHGPTLLRSMIKPTYDILKSVTGGAIIFVPSVQACATVAADLVTQSGTEMNLNGFL
SRPRHEIEPFTERLKDERLFEPMLHGIGYITRDMAPTDLAIVLELFASGIIRAIIAPRQS
CWTLPVRGDSVIIMGTQYVHVSARPEDKGAKAKPGKHLVSYSAQELVKMQGFAVASAAPT
ALGGRMFIMCPAEQQVMISRVLKEGLPLESKILNLLSRRSTSSSSVDPRAIQALTNLFKG
RRPPPRPTVDRPLRPDGRKADMMDIVNWSFLSVRAKSNPSYYQLVKRSEAEGISRVIDGW
FDSMDGVKVETVEEQRVLTVEEAKAQDDRGDDSEKADVNSDQEDGAAGCEADGTLNLDEA
EQSGTESKKS
NT seq 5253 nt   +upstreamnt  +downstreamnt
atgtctgttcagcattacctgggcactcttttccagccccaacctccaacacttgaggat
agttggaaagctgttatctcaagctggggctcctcccagtttcgtgctcaagcagtcgat
gatgttgagccagtcttggatacttcaccatggccttctgttctagaatatctatccatc
actggtctgccatccgtaaacctagagcctcctcccatcgaatctgcacccgagtcctca
ttatcaacgagagctgatgtggtcgatcgtttgcgccagcacattcctaccacttttgga
tcactcgtcaatcttctgtctactccgcgctcaaacgatgatatacagtccgaattgatc
gagattatggggttcgagggcgatgccctgtcactgatcgaggaattgttaaaaccagga
gcaagacaaaatgtcgtagacagctgtttgcgctctacccctagtgagcaagacaagaat
gaagcgaggcctgtacagacggacaagcccgcatatctaccaaatgcgaggatgacagtg
aagaaaaaggtcaaagataagaaaaaggtcatagacatctcagacattgttggatccgcc
gaagatatcaacagaaggttgcaagagcagattgaaggtcccaaagcgatgttctcggag
gatggtcccaaaatgatcgagcaagagattttgccacacgtttacacagcaactgggaac
aagttcgtctctctttcccaaggtggaaagttcgcccttcctgaaggtacaaaacgagaa
tactcagatgtgggtcgcccttttccgttgacgacatatgaagaggtaattataccccca
gcgaatcctgtgccgcccacgaaaacagagcgccctgtcaagattgctgaattgtcctcc
atggctggaggttgtttccctaaatatatccagttgaataggatgcaaagtattgtacag
cccactgctatgaacacaaacgagaacatgttgatttgcgcgcccactggcgccggtaaa
actgatgtggctatcatggcaattatccgtgttctgtctcagcatgttatcgacggtcct
acctcccatccttcaggtttcaacatcaaccgcaacgctttcaaaattatttacgttgct
cccatgaaggcccttgcctcagaaatcgtgtctaaatttgcaaagcgtcttgcatggctc
agtatcaaggtcagagagttgactggagacatgcagttaacaaagcaagagattgaagaa
acacaaatcatagtgacaacgcctgagaaatgggatgtagtgactagaaagccgacaggt
gaaggggaactggcttctaaagtcaagttgcttatcgtcgatgaggttcacttgcttgca
gaagatcgaggtgccgttattgaaactatcgtagccagaacactaagacaagttgaatca
agccaatctcttattcgtattgtcggcctcagtgctacgctgccgaactatgtcgatgtt
ggagatttcttgagggtaaatcgacatcaaggtcttttttatttcgacgcttctttcaga
ccaattcctcttgagcagcattttattggtgtttccggaaagcctcgttcaaccgtctct
gcacgtaacatggatcgagtcgtttttgaaaaggtttctgaacttgtggaggctggtcat
caagtaatggtgtttgtgcatgcacgacgagacactgtaaagactgcacaaactctcaag
gaaatggccttagaagaaggtgtctccactttcttccagaccgatggccacgccaaattc
agtcagtacagagcagagatctccaagtctagaaacaaagagatgaaggagctattcgat
gccggattcggtatccaccatgcgggtatgctgagaacagaccggaatatgatggaaaag
atgtttggggatggttgcattaacgtcctatgctgcacctcaacgttggcctggggtgtc
aatcttccggcacatgctgttatcatcaaaggaacccaggtttatgacaccggcaaaggt
tctttcatggatctctctgtcctcgatgtccttcaaatcttcggccgagctggtcgacct
ggatatgcaacaagtggtgtcggctttatatgtaccacccacgacaaagttgatcactat
gtgacagcggtcatgtctcagacgccaatcgaatccaaatttattcccggcatgacagac
gctcttaacgctgaggtagcgttaggaacaattactaatgttcaagaagcgatgcaatgg
ttgagttacacctatctcttcgttcgcatgaagaagaacccttgggtttatgccatggct
catgatgtcacaaaagacgacccgcaactgggtaataagcgtaacgagcttattgtccaa
gctgctcgtcttcttcaaaaggctaggatggttcgatatgatgatttggccaacacattc
ggtatcacagatttaggtcggattgcagccaagtattacctcaggttctccactattgag
attttcaacagtaaattcaatccgcgaatgagcaatgcagatctgttccaaatgctatgt
gaagcaactgagtttgagcaaattcagcttcgagacagcgaagtggaagaacttgaggcc
attattggtagtggtgtcatcccattggaagttgctggcggtgcgatcaacaagcgtagc
aaggtcaacatcctgctccaagcgcatatctccaatgtttacattaacgattttgctctc
gtttctgacgcggcatttgttgcacaaaatgccggacgtattattcgcgccttgcttgag
attgctcttagccgtaactgggccaattgttcctacctgcttgtcgagctcagtaaatgt
attgaacgccgacaatgggtttacgatcatggtctcgcccagctcaaggtgctccagcgt
gaaactattcacaaacttactcagtatacgcccgacagcatgaccatttcggattttcga
gacatgactgctcaagagaatggggagtttattcatatgaacgagaagcatgggcaggct
gtcttggatgccgcgatgatgttcccaactgtcaacctcacccacactttgcggccgatt
acccatgatctgctacaaatcactgtcaaggtcacaccacaattcaaatggcatagcaag
atctccggcagcagcgaaccgttttatgtatgggttcaagatgaagaaggtttgaatatt
taccagtggcgtaatgtccgaatcacgccctcaactagcgctatcatcatcgacttcttc
ctaccttttgatgatgtgcctccagattcgatatcaattatctctatatccgacaaatgg
ttatggtcctacgagcagctcgtcattcagctgagcgatctaataatgccgcctcctcca
aaagaatccactcaaattcttagcgttccattcctgcgccgctcatgcttcaatgatccc
cagttagagcagcgatatgctcacacgttggacactttgaatacagtccaaagccatgcc
ttctggatgctttataacacttctatgaacgctgttatctctgctcctgttggaagcgga
aagactctactggctgagggtgctgtatggaatacttttcggcataacaaagagtcggtt
gtcttaataatagtgcctgagcgctacgctgttcatgaggccgttgccagattgcgaagt
ttatgtcctccaaagcgaagagtagtcatcaaaactctctttaacgtgtccgactttgaa
caactcctctctggagggcctgctattggagttacgacaccttttgcaatcctgagcaat
gataaaatagataatttcctgaatactcaacgcttagggttgtatgtctttgaagaccta
caccgtctcgatgaagtgtacgaacttgccgtgtcaaaaattttgactttcgcccggact
gcacgaactcgaattgttgggacaacgtcatctctcaacgatccctctgatcttgctgaa
tggcttggggttgatcctggcccactggatcaatggggaaagcctgtcgcttcacaacct
cccgctttgttcagtttcgctccatcagatcgggacaatcatatttctgtgtccatcaaa
tcgttcactattcctcatggtcctaccttgcttcgctctatgatcaaacccacttatgat
atcctcaaatccgtaacaggtggtgctatcatatttgtaccatccgttcaagcttgtgca
acggtcgctgctgaccttgtcactcaatccgggaccgagatgaaccttaatggcttcctt
tctcggcctcgtcacgagatcgagccattcactgaacgcttaaaagatgagagattgttt
gaaccaatgctccatggcattggctacattactcgtgacatggcaccgacggaccttgcc
attgttcttgagctttttgcgagtggtattatccgtgctatcatcgcccctcgccaatcg
tgttggacactcccagttcggggtgacagtgtcatcattatgggtacgcaatacgtacac
gtgagcgcgagaccggaagacaagggggccaaagcaaagcctggaaaacatttagtaagc
tattcggcgcaagagttggtgaagatgcaaggcttcgctgtggcttcggcggcccccact
gccctgggtggaaggatgtttatcatgtgcccagcagagcagcaagtcatgatctcccga
gtgctcaaagagggtctcccattagaatctaaaatcctgaatcttctttcacgcagatca
acatcctcctcttcggtcgacccaagagctatccaagctctcactaacttattcaagggt
cgcagacctcctcctcgtcctacagtcgacagacccctcagacctgacggcaggaaggca
gacatgatggacattgtgaattggtcgttcctttctgtcagagcgaaaagcaatcctagc
tactaccaactcgtcaaaaggtcagaagcggaaggtatttcaagagtaattgacgggtgg
tttgattctatggacggagtaaaggtggagactgttgaggagcagagggtgctgaccgtt
gaggaggcgaaagcgcaagacgatagaggggatgactcggagaaagcagacgtaaattct
gaccaagaggatggcgctgcgggctgtgaggcggatgggacgctaaatctagatgaggca
gagcagagtggcactgagagcaaaaagtcgtag

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