Cryptococcus gattii: CGB_M2260C
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Entry
CGB_M2260C CDS
T02232
Name
(RefSeq) member of the DEAH family of helicases; Mph1p
KO
K14635
ATP-dependent DNA helicase MPH1 [EC:
5.6.2.4
]
Organism
cgi
Cryptococcus gattii
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgi03400
]
CGB_M2260C
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGB_M2260C
DNA repair and recombination proteins [BR:
cgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CGB_M2260C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
10186162
NCBI-ProteinID:
XP_003197333
UniProt:
E6RFC4
LinkDB
All DBs
Position
M:complement(join(434684..434709,434762..435119,435172..437088,437140..437268,437321..437428,437477..437587,437641..437862,437910..438086,438150..438224,438273..438484,438530..438629,438680..438840,438880..439068,439118..439886))
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AA seq
1517 aa
AA seq
DB search
MSEDEFGDDSIFLDDSFLRQVDTISAQVTAGSSSWRNDGLRPATAVSRTASHNEVSPRRS
QNVHSVGRTFSAPGTISNPLSHHRPAAISRQQAVSKVPLQPSSDDYDLIDIPTESLAAFD
AIIANPPKKPSHPSFSGFPPKPSTSALSSRSTSGSSRPSSSSARHPISSNRQDNFHQTHL
NWRSESRYTKGKRWDRTQFAKTGRRIISLTGRDKVSGGKGKERESIAPGWGNDAIDEDEF
MDDDMGDLLAPAPRDFNAPYGPQKHLPSKATISTYIYPTNHPKRDYQFEIIRNCFLDNTL
VALPTGLGKTFVAGVVMLNFYRWFPTGKIVFLAPTRPLVAQQIEACQLSCGIPSRDAAVM
TGEGGARKGRERLWEEKRVFYCTPQTLDNDLKNGAVDPQDIVLVVLDEAHKATGNYAYTT
IVAYLTAHHPYFRVLALTATPGADVEKVQNVVDALHISRIEIREAEAPEIRKYMNTKHIE
KHVVAMSDVIIDFRDRLSALMVPFIKKLVDKDILTERDLDAKRLRPFRITAKKMELGKSG
QRWAFGPLGVLDKMARAMSHLLEFSLGMFHSSLDEMVSTSGKSKAGAGGANSIANNFEFQ
RLQRDVSQELSSIKIGRNGKTGADRHPKMQKALELMLAYFSQAEEEENTLGQKNNTRAMV
FCSLRPCVMELVDMFNEHANLLRATKFVGQSNGKDERDKGFNQKEQKKTISEFKAGTFNI
LVSTSIGEEGLDIGEVDFVVLYDMPRQSIKLLQRIGRTGRKRDGIVHVLMSENREDMNWD
TAQQTHRDIQEEILHSRNLELFEDVEPLIPDRKMPECLEQVMPVDPWNPDDPQYKKMMDE
GEKELRRMQRAQQPPASRKKKKPLVNEVPLNAKGFTSVRDLLREADKVLLRPDTEEEDAE
VDGGKGKGKGKGKAKAKEPAAPKIKHRARKRARTPSPIQTEWESGEDQSMEALFSALEKE
DRTGEPSSKRKAPVTKPALVTKRARKFSPDLSIPSLAETESAAKALISTGKPTVDALQAE
HGIVSEVDSDNIPVSPPQPALSKVLSPQPPSATPEHDNAMQRKSIQQKRAEAAEKRRLAE
ARAAEARQRHVQQPLQQQNQQNQQRKEQDQAGLDFFHAEGPLRRGLDPLVDASSSPEKAA
SSSPQKSRFSSPSKSAIDDEILLPPLPPQRPNSKPNGNKLSPRTAAAAGFSQIDPIDLSW
DGDDDDEADAAHWQVSPSHLVRPLLPKTPGSSVNPRLDMPPPPVPSTSRRGILPSSPFAP
PSEPRAMSTSVGDTQFPVRRIGMARRRIVLPSPEENNSPVGRAINTYANPSKVQSSGVVD
PDSSPMVAVGARRRPGRLRRRIAIDPSSSPVRDEPSGRSNQPHATVGGRERRRQNGRQGG
KKKKGPIGNFMDLDAELSGNDSGDTSEHSASSIANSSDLNFADDFAPTQAPKGYNQRAIY
LAGLSTQAQGHGLQFKRDMAKEREGFLQRARRPVYITDEEDGGPRRRSSEDEYELGSFIV
DDEEDVGFISHSDPLFD
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagatgaatttggagacgactcgatattcttggatgactctttcttgcgacag
gtggacaccatatctgcccaagtgacagcgggctcaagctcttggagaaacgatggatta
cggccggcgacagccgtaagcaggacagcctcgcataatgaggtctctccaaggagatcg
cagaacgtgcacagcgtgggaaggaccttctctgcacccgggactatttcaaaccctcta
tcacaccatcgcccggcagcgatctcgagacaacaggcggtgtcaaaggttcctcttcaa
ccctcttccgacgactatgacttgatagacattcccaccgaatcactggctgctttcgac
gccatcattgccaatcctccgaaaaagccttcccatcccagtttctctggtttccctccg
aagcccagcaccagtgccttatcatctcgcagtacaagtggatcctctcgtccttcgtct
tcgtctgctcgtcatcctatttcctcaaacagacaggacaatttccatcaaacccatctt
aactggcgctccgagtcccgatataccaaaggcaaacgatgggataggacgcagtttgct
aagaccggcaggcgtatcatttctttaacagggcgagacaaagtctccggaggcaaaggg
aaggagagagagagcatagctcctggttggggaaatgatgctatagatgaagacgagttc
atggatgatgatatgggtgatttattggctcctgcacccagagatttcaatgctccttat
gggcctcaaaagcatttaccgtctaaagcgacaataagcacctacatataccccaccaat
catcctaagcgagattaccagtttgagattatacggaattgctttttagacaatactctc
gttgctcttccgacaggtttgggaaaaacttttgtggctggcgttgtcatgctaaatttc
taccgctggtttccaactggcaaaatcgtatttcttgctcccacacgacctcttgtggcc
caacaaattgaagcttgtcaactttcttgtggtatacctagtagagacgcggcagttatg
acaggtgaaggcggagcgagaaaaggccgcgaacgtctgtgggaggaaaaaagagtattt
tactgcacaccgcaaacgctagataatgatttgaagaatggtgcagttgatccgcaggat
attgtgcttgtggtccttgacgaggctcacaaagccactggcaactacgcctacaccacg
atcgtcgcctacttaacggcccatcacccgtactttcgtgtcttggctttgacagccact
ccaggagcggatgtggaaaaggtgcagaatgtggttgatgcgcttcatatttcgagaatt
gaaattcgagaggccgaagcaccggaaatcaggaaatatatgaacaccaagcatattgaa
aaacatgtggtagccatgtcggacgtaatcattgacttccgcgatcgtttatctgcactg
atggtgccgttcataaaaaagcttgtcgacaaggacatcctcactgaacgcgatcttgat
gccaagcgcctgcgcccattcagaattacagctaagaagatggaattgggtaagtcgggg
caaaggtgggcctttggaccactgggagtgttggacaaaatggcaagagcaatgagccac
cttctggaattctctctgggcatgtttcattcctctcttgacgagatggtgtccactagt
ggcaagtcgaaggcaggcgcaggcggtgcgaatagcattgccaataattttgagtttcaa
cgacttcaaagggatgtctcgcaggagcttagttcgatcaagatcggaagaaatggaaaa
acgggcgctgatcgccatcctaaaatgcaaaaagctctagaattgatgcttgcatatttc
tctcaagcagaagaggaagaaaatactttgggtcaaaaaaataacactcgagccatggtt
ttctgctccttgagaccttgtgtgatggaactggtggatatgttcaatgaacacgctaat
ttgttgagagctaccaagtttgtaggacagtcaaatggtaaagatgaaagggataagggc
ttcaatcaaaaggagcagaagaagactattagcgagttcaaagcgggcacgtttaatatc
ttagtttcaacttccattggtgaagaaggattagatattggcgaagtcgacttcgtggtg
ctctatgatatgcctaggcagtctataaaacttctccaacgtattggccgtactggccgt
aaacgagatggcatagttcacgtgcttatgtcagaaaaccgagaagacatgaactgggac
acggcacaacaaactcatcgcgacatccaagaagagatccttcattcacgtaacctagag
ctgttcgaagacgttgaacctctcattcctgatcgcaaaatgccggagtgtttggagcag
gtcatgcctgttgatccttggaatcctgatgatccacagtacaaaaagatgatggatgag
ggagagaaagaattgaggcggatgcaaagagctcaacaaccgccggcaagcagaaagaaa
aagaagccattggtgaatgaagtgccgttgaatgctaaaggtttcacaagtgtgcgagac
cttttgagggaggctgataaagtgctattgaggccggatacggaagaagaggatgcagag
gttgatggcggcaaaggcaaaggcaagggtaagggcaaggcgaaagcaaaggaaccagct
gcaccaaaaattaagcacagagctaggaagagggcgagaaccccttcccctattcaaact
gaatgggaaagcggagaagatcaaagcatggaagcattgttcagtgctctcgagaaggag
gaccgtacaggagaaccatcatcaaagaggaaggccccagtcacgaagcctgctttggtc
acgaaacgggcccgaaagttttcacctgatctttcaatcccttcgttggcggagactgaa
tctgctgcgaaagcacttatttccaccggaaagcctactgtcgatgccctccaagcggag
cacggtatagtatcggaagttgactctgacaatattcctgtgtcgcctccacaacccgca
ctttcaaaagttctatctcctcaacctccgtccgccactccggagcatgacaatgcaatg
caacggaagagcatccagcagaagagagcagaagcggcagaaaaaagacgtttggcggag
gctagagcggctgaagcgcgacaaaggcacgtacagcaaccgttgcaacagcaaaatcag
cagaatcagcaaagaaaagagcaagaccaagcaggactggattttttccatgctgaagga
cccttacgtcgtggtttagatcccctcgtagacgcctcgtcatctccggaaaaagcagcc
tcttcgtctcctcaaaagtcgcgcttctcttcgcccagcaaaagtgccatcgacgacgag
attctattaccccccttacctcctcaacgccctaattccaaacccaacggaaataaacta
tcaccacgaactgccgctgctgcaggtttcagccaaatcgaccccattgatctctcatgg
gatggcgacgacgacgatgaggccgatgctgcccattggcaagtctccccttcccatctt
gtacgtcccttattacccaagacccctggtagcagtgtgaaccccagacttgatatgcct
ccaccccccgtaccatcaacttctagaaggggcatattaccctcatcgccttttgctccc
ccttcggaaccgagagcgatgagtacatctgttggggacacacaatttcctgtgagaagg
ataggcatggccaggagacggatcgtcctgccttctcctgaagagaacaattctcccgtc
ggacgagctataaatacttatgcgaacccttctaaggtgcaatcatcaggagtggtagac
cctgattcttctcccatggtggcagtaggtgctcgaagaaggccaggaagattgcgaagg
agaatagcaattgatccaagcagctcccctgtgcgagatgaacccagtggcagatctaat
cagccacatgccacagtcggtggcagagaaagaagaaggcaaaatggaagacaaggaggc
aagaagaagaagggaccgatagggaatttcatggatctcgacgctgagctttctggaaac
gattcgggtgatacctctgagcactcggcttcctctatcgccaattcatctgatctcaat
ttcgcggacgacttcgctcccacccaagcaccgaaaggctacaatcaacgggctatatac
cttgctggtcttagcacccaagctcaaggccatggtctccagttcaagagggacatggcc
aaagaacgggagggatttctgcaaagagcaagacgaccggtgtatattaccgatgaggaa
gatggagggccaaggagaagaagcagtgaggacgagtatgagcttggcagctttatagtg
gatgatgaagaggacgtagggttcatctctcatagcgacccacttttcgattaa
DBGET
integrated database retrieval system
