Carassius gibelio (silver crucian carp): 127937978
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Entry
127937978 CDS
T08819
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127937978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127937978
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Major cadherins
127937978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Big_9
Motif
Other DBs
NCBI-GeneID:
127937978
NCBI-ProteinID:
XP_052390285
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Position
A20:complement(12102826..12114428)
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AA seq
1165 aa
AA seq
DB search
MARRISPAVAFLFCFGLSNVFEVEARFQNSVALHRQKREWIIPPQILEENVDYTKREFIA
KIRSDKEDLKQRNVKYSLRGIGADQRPFNLFVVDPESGYVRITGILDRETIAMYNLSGTA
TFRNDTIAENDIGLRIKVKDQNDNPPVFGPMEPGNVYELSKVETSVMKVNCFDADEEGHP
NSQIKYEIAEQQPAGDQMFRIDTDGTVLVTNPNLDRETIDQYVLLIRASDLYGAQGCNVA
TGTVTIQIMDVNDNAPTLEGPFEATIEENTEKIEVMRLKVTDKDLEKTENWESNCFIASG
NEAGYFSIHTDPKTNDAVIMLDKAVDYEDVKDLKLTIGVKNKAPFHPSVTGGQQGVNINY
GGTGDGAGGGGGGGGGGGGGGGGGGGGGGGGGSGSGSGGGGAAGSMSGSQMYNLNIKVKN
QPEGPKFVPLTKAIPISEGKTFNSNEVITRYPAIDTDTQKEATNVKYVKGSDPDNWLTID
EKTGDIRLNKAPDRESKFLVNGTYYAQIYGITQDLPSKTATGTIAIQVEDFNDHCPTLKS
KVTTLCTEKDAVLVTAVDEDAPPNGAPFSFNVVPEGTMGKWTVEYLNETTAIFRTHEKLW
PGEYKLTVEVKDQQGLSCPEPQKFQVDVCTCTDLEACDRTGVDGQTGAFKKGSRLGPAGI
GLLFLGLLSLLLIPLLLLLCQCGAAGMAGAFTDMPFDTKEHLISYHTEGQGEDRDVPLLD
VVDGRKMSFLSKDGVGGMYFAGGALGAGGALGAGGALGAGGAGFLESTSTMGGRGYNDME
MSYLNSIRRNDTLRSREMIGFDGMAVSEMFLGEYYSQKSRAIEDGFGKNEAMVYDYEGKG
SPVGSVGCCSILEDNNDLEFLNDLGPKFTTLAEICGGKKKEAPAPLPPPAKPIVDRTEVS
SSTNVINSGNITTNRAISSNALNTASNTAMTSSTHVENFLVTDNRPTMITSVQPAPTVLM
QPQQMYYMVEPQPSTVLLTERPSMGQSMYVLNSGPVSEGMVVQGGNIASNTLTRGERMVF
VDRGAPAQAGMLHTGSLSGSQVLLVDGGATSGHILQGGQVLQGTLQRGFAGSQGVMVVEG
QGGQLIQGTLKKGVSTHGGSQNVLYMESKGGSGVSQGGLQMGMSATAGSFGSVGSGGSSV
QINQNPSSHKVVVQERKVVTTQSIK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcgtatctcgcctgctgttgcttttctgttttgtttcggattatcgaatgtg
tttgaggttgaagccagattccagaactctgtggccctccacaggcagaagagagaatgg
atcatccctccccaaatcttagaagagaatgtggattacaccaagagagaattcatcgca
aaaattcgctcagataaagaagacctcaaacagagaaatgtgaagtactcactgaggggc
atcggtgcagaccagaggccgttcaatttatttgttgtggatcctgaaagtggatatgta
aggataacagggatccttgatagagagaccatcgcaatgtacaatctttcaggcactgct
acattcagaaatgacacaatcgcagagaatgacattgggttgagaataaaagtgaaggat
cagaacgataatccgcctgtttttgggccaatggaacctgggaatgtgtacgagctcagt
aaagtagaaacatcagttatgaaggttaattgctttgatgctgatgaggaaggacaccca
aactctcaaatcaagtatgagattgctgagcagcagccagctggggatcagatgttcaga
attgatactgacgggacagtccttgttaccaatcctaatctggatagagagactattgat
cagtatgtcctgcttatcagagcatctgatctgtacggagcccaaggctgcaatgtcgcc
acaggaacagtcaccatccagatcatggatgtcaatgataatgcgcctacattggaaggc
ccatttgaagccactattgaggaaaatacagagaaaatagaggtgatgagacttaaagta
accgacaaggatcttgagaaaacagaaaactgggagtctaattgctttattgcatcaggc
aatgaggctggatacttcagcattcacacggacccaaagaccaatgatgcagtcattatg
ctagacaaggctgttgattatgaggatgtcaaagacctgaaacttaccattggtgtaaag
aacaaagctccgttccacccctctgtgactggaggacaacaaggagtaaacataaactat
ggtggcaccggtgatggcgcaggaggaggaggaggaggaggaggcggaggaggcggaggt
ggaggtggaggtggaggtggaggcggtggtggtggcagtggcagtggcagtggaggcgga
ggagctgccggttcaatgtcagggagtcagatgtacaatttgaacataaaggtgaaaaat
cagccagaaggacccaagttcgttcccctaacaaaagccattcccatctctgaaggcaag
acttttaacagcaatgaggtcatcacaaggtacccggccattgacacagacacccaaaag
gaagctaccaacgtcaagtatgttaaaggatctgacccagataactggctgaccatcgat
gagaaaactggggacattagactgaacaaggcacctgaccgcgagtccaagtttcttgtt
aatggcacttactacgcccagatttacggcataactcaagacttgccttcgaagacggca
acaggcaccattgccatccaggtagaagattttaatgaccactgcccaactttgaaaagt
aaagtcacgacactttgtactgaaaaggatgccgtcttagtcactgcggtggatgaggat
gcaccgcccaatggggctccattcagcttcaatgttgtcccagaaggaactatggggaaa
tggacagtcgagtatttaaacgaaaccactgccatcttcagaacccatgaaaagctgtgg
ccaggagaatacaagctgacggtggaggtcaaggaccagcagggattatcatgtccagaa
cctcagaaattccaggtggatgtgtgcacctgtaccgacctggaagcttgtgaccgaaca
ggagtagatggtcaaacaggagcatttaagaagggatccagattgggacctgctggaatc
ggccttctcttccttggactgctttcattattgctcatcccactcctgttgctgctgtgt
cagtgtggagctgctgggatggcgggagctttcacggacatgccctttgacactaaagag
catctcatctcttaccataccgagggccagggagaggacagggatgttcccctacttgat
gttgttgacggacgaaagatgtcttttctgtcaaaagacggtgtgggtggtatgtacttc
gcaggaggagcgttgggagcagggggagcgttaggagcaggaggagcgttaggagcagga
ggagcaggcttcctggagtccacttccacaatgggtggccgtggctacaatgacatggaa
atgtcctacttgaactcgatcaggagaaatgatactcttaggagcagagaaatgatcggt
tttgatggaatggccgtgtctgaaatgttcctgggtgaatactattcacagaaaagccgt
gcaattgaggatggatttggtaagaatgaagctatggtgtatgactatgaagggaagggc
tctcctgtgggctctgtgggctgctgcagcatcctcgaagataacaatgacctagagttt
ctcaatgacctcgggcccaagttcactactctcgctgaaatatgtggcggtaaaaagaag
gaggccccagctcctcttcctcccccggccaaacccatcgtggaccgtaccgaggtgtct
tcatcaaccaatgttataaattctgggaatattaccactaacagagctatatcttcaaac
gctctgaataccgcttccaacacggctatgacatcatctactcatgtggagaacttcctt
gtcacagacaaccggcccacaatgattacgagtgtgcaaccggctccaacggtcctgatg
caaccccagcaaatgtactacatggtggagccgcagcccagcacggttctgctcactgaa
aggccctccatgggacagagcatgtacgtcctgaacagcggcccggtatccgaggggatg
gtagtccagggaggcaacatagcatctaataccctgacccgcggtgagagaatggtgttt
gtggacagaggtgcaccggctcaggccgggatgctgcacacaggtagtctgtctggatca
caagtgctcttggtggatgggggagccacaagcggtcatatccttcagggtggtcaagtc
cttcaggggacgcttcagagagggtttgctggatctcagggcgttatggttgtggaagga
caagggggtcaactgattcaggggaccctcaaaaaaggtgtttccactcatggtggatct
caaaatgtcctttacatggagagcaaagggggatcaggtgtgagccaggggggtcttcaa
atgggcatgtcggccaccgcagggtcatttggtagtgtcgggtcgggtgggtcatctgtc
cagatcaaccaaaacccatcatcacacaaagttgttgtccaagagagaaaagttgtgaca
acacaaagtatcaagtaa
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