KEGG   Carassius gibelio (silver crucian carp): 127938925
Entry
127938925         CDS       T08819                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    127938925
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127938925
Enzymes [BR:cgib01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127938925
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127938925
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127938925
SSDB
Motif
Pfam: SH3_1 SH3_9 SH3_2 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-RING_11 Prok-RING_4 zf-Nse
Other DBs
NCBI-GeneID: 127938925
NCBI-ProteinID: XP_052391808
LinkDB
Position
A20:15235212..15279750
AA seq 887 aa
MNDYAEKDCASVKMDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRAEL
RCPECRTLVESGVDELPSNILLVRLLDGMKQRPRRTGSVHGTFTNGSAVAGVRAQGAGGG
QRDPGPTGVQSQRVQAKSTPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDE
NWYHGEMGGVHGFFPTNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTV
IRRVDENWAEGMLGDKIGIFPISYVEFNSAARQLIELDKPSEGGGDPSEGPSSSSSGPQV
NGSQKATGEKKNSKKRHSFTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGE
LSGGLSSSAPSQVHICTAGLIVTPPPSSPVTTATVFTFPPETSYASIPVDALPPPPPPPP
QSVSSAVGAAALNAGQRPSPAAGDQSGRHRPTVYVAMFPYTPRKEDELELRKGEMFLVLE
RCQDGWFKGTSMHTGKIGVFPGNYMSPVNRTVSGSSQPKVPLTLCSQAGRGVTIISPSSA
SLGATLGSVDPSKSLPVCPNPTPSCPLPAAVVSAAHIPTGQHPKVLMHVTSQMTVNQARS
AVRTAVCHSQDRPTAAVTPIQSHNPVSYLPSTAVVLQASPVLGSSPGSSSVRVGVAMGCA
AASLTPPNVSAASLDSDVMRAVPVVALPVNPGSAKSLGSASNHGVACRLDKDCKREKKGL
LKLLSNKKKLRPSPPSSPTLEAEQSVVMEMPQGAVGPEMAPASSVAAGHNGRAGTCPMDP
ELSASSSSSNTDGVSHRSCSQDNPAPIAPPPRQPCSSLLSMQHDGRPIVCERYRVVVSYP
PQSEAELELKEGDIVFVHRKREDGWFKGTLQRNGRTGMFPGSFVDSI
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgaacgactacgctgagaaagattgtgcgagtgtgaaaatggacgagtctgcgctcctg
gacctgttggagtgtccagtgtgcttggaacggctggatgctacggcgaaggtgttgccg
tgccagcacacattttgtcggcgctgcctgcttggaatcgtggggtcgcgtgcagaactg
cgctgcccagagtgccgcacgctagtggagagtggcgtggatgaattgcctagcaacatc
ctcttggtacggctactggacggtatgaagcagagaccgaggaggacaggaagcgtgcat
ggcacatttactaatggatctgcagtggcaggagtccgagcgcagggagctggaggaggc
cagagagatccaggtcccacaggggtacagtctcagagggtccaggccaagagcactcca
gttaggggtgttcctcagctaccctgtgcaaaggccttatacaactatgatggcaaagaa
cctggagatctcaagtttagcaagggtgacatcatcatcctgcgccgacaggtggatgaa
aactggtaccatggagagatgggcggagtccatggattcttccccaccaactttgtccag
gtcataaaacctctcccacagccgccccctcaatgtaaggccctgtatgactttgagctg
aaagacaaggaggctgacaaggactgcttgccattttcaaaggatgatattcttactgtg
attcgtcgtgtggatgagaactgggcagaaggcatgctgggagataagatcggcatcttc
cccatatcttatgtagagtttaacagtgcagcacgacaacttatagaactcgacaagcca
tctgaaggtggaggagaccccagtgaagggccatcttcttcttcctcgggcccccaggtc
aacggctcccagaaagccactggggagaagaagaacagtaagaagcgtcactccttcacc
tctctgactatgtcccataagccctgcctggcccctccaccccagagacactccatggag
atcagtggcccggttctgatcagctcctccaaccctacagctgcggcccgaatcggagag
ctcagcggaggcctgtcctccagcgcaccttcacaggttcacatttgcacagcaggactc
attgttacccctccacccagcagtcctgtcaccaccgcgacagttttcacatttcctcca
gaaaccagctatgcctcgattccagtggatgctcttcctcctccaccacctcctccacct
caatcagtgtcttcagctgtgggcgctgctgccttgaatgctggtcagaggccgtctccc
gctgcgggtgaccagagcggccgtcacagacccacagtgtatgtggcaatgtttccctac
acgccccgtaaggaagatgagctggaattgaggaagggggagatgtttctggtgctggag
cgctgtcaggacggctggtttaaaggaacatccatgcacaccggaaagattggagtgttc
cctggtaactacatgagtcctgtcaacaggactgtttctggcagcagtcagccaaaagtt
cccctgaccctttgctcccaggctggacgtggtgtcaccataatcagcccctcctctgct
tctcttggagccaccctggggagtgtcgaccccagcaaatcccttccagtctgcccaaat
cccaccccgtcttgtccacttcctgctgctgtagtatcagctgcacatatacccactgga
cagcaccccaaagtgctcatgcatgtgacgtcacagatgaccgttaaccaggcacgcagt
gcagtcaggacagctgtgtgtcacagtcaggaccggcctacggcagcagtgacgcccatc
caatcccacaatcctgtgtcctaccttcctagcaccgctgtggttcttcaggcgtcacct
gtcctcggctccagcccgggatcctcctcagtcagggtcggcgtggctatgggctgtgcg
gccgcctccttgacccctcctaatgttagtgctgcttctttggacagtgatgttatgaga
gctgtccctgtggtagcacttcctgtgaaccctggcagtgcaaaatctctcggttcagcc
tcgaatcatggtgttgcatgtagactggataaagactgcaagagagaaaagaaaggccta
ctgaaactgctgtctaataaaaagaagctccgcccatcacccccatcctcccctacactg
gaggcggagcagtctgttgtcatggaaatgccccagggggcagtcggacctgaaatggct
ccagccagctcagtggcagcaggacacaacggccgtgctgggacctgtccgatggatcct
gagctctctgcatcctcctcttcatcgaacacagatggagtgtcacacagaagctgctcc
caggacaaccctgccccaatcgccccgcctccacgacagccatgctcctccctcctctcc
atgcagcatgacggccggccaattgtttgtgaaaggtaccgtgtggtggtgtcctaccct
ccccaaagcgaagcagagctggagctcaaggagggagacattgtgtttgtgcacagaaaa
cgagaggacggctggtttaaaggaacgctacagaggaacggccgaactggaatgtttcct
ggcagctttgttgacagtatctaa

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