Carassius gibelio (silver crucian carp): 127946142
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Entry
127946142 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127946142
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127946142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_5
zf-RING_10
zf-RING_6
DUF1043
DUF4407
Motif
Other DBs
NCBI-GeneID:
127946142
NCBI-ProteinID:
XP_052398430
LinkDB
All DBs
Position
A24:complement(14173490..14176890)
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AA seq
571 aa
AA seq
DB search
MMAEASIPVAQDEFSCPVCLDLLKDPVAIPCGHSYCKICITDCWDQEDQKRVYSCPQCRQ
TFSPRPALSTNVLLAEMLEKLKKTRLSDDCSSGSGDVQCDVCTGKKHKAVKSCLVCLNSY
CHNHLEQHESFFRGKKHKLTEATGRLQEMICTTHEEPLKLYCRTDQRCICYPCVMEEHKN
HETVTAEAERTEKQRVLKETQKTLQQRIQQREKDLQQLRETVESHKRSAQTAVEDSERIF
TELIRSIERSRSELIRLIRDQEKTAVSRAEERLERLEQEINDLRRRDAELEQLSHTQDHI
QFLQSFSVPPESTEQPVTISSHFSFTDLEKSVSRLKDKLEDFCKEEIEQISGRVTYIEII
PLEELKTRPELLRYCRFLTLDPNTVNEDIHLSERNRAALSTETVQSYPDHPDRFDCVWQV
LCRESVCGRCYWEIEWSAGDGVDISVSYKSISRKGDGDECWFGCNDQSWSLDCSPDSYLF
IHNKIQTAFPVESIIRKTGVSDDDDDDDDDVRRIGVFVDHRAGTLSFYSVSDTMSLIHTV
QTTFTQPLYPGFGVYKGSSVKLCDLTAEMDT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgaagccagtattccagtggctcaggatgagttctcgtgtccggtgtgtctg
gatctcctgaaggatccagtggctattccctgtggacacagttactgtaagatctgtatt
acagactgctgggatcaggaggatcagaagagagtctacagctgtcctcagtgcagacag
accttcagtccaagacctgctttatctaccaatgtgctgctggcagaaatgctggagaaa
ctgaagaagaccagactctctgatgactgttcctctggatctggagatgtgcagtgtgac
gtctgtactgggaagaaacacaaagccgtcaagtcctgtctggtgtgtctgaactcttac
tgtcacaatcacctcgagcaacacgagagcttcttcagaggaaagaaacacaaactgacc
gaagccactggacgactgcaggagatgatctgcactacacatgaagaaccgctgaagctc
tactgcagaaccgaccagcgctgcatctgttatccgtgtgtgatggaggaacacaagaac
catgaaactgtgacggcagaagcagagaggacagagaaacagagggtcctgaaggagaca
cagaagacgctccagcagagaatccagcagagagagaaagatctccagcagctgagagag
actgtggagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttt
actgagctcatccgctccattgagagaagccgctctgagctgatacgactgatcagagat
caggaaaaaactgcagtgagtcgagctgaagaacgactggagcgactggagcaggagatc
aatgatctgaggaggagagacgctgagctggagcagctttcacacacacaggatcacatc
cagttcctgcagagtttctccgttcctcctgaatccacagagcagcccgtcaccatcagc
tctcacttctctttcactgacctggagaaatcagtttctagactcaaagacaaactggag
gatttctgcaaagaagagattgaacagatttctggcagagtgacatacatcgaaatcatt
cccctcgaggagttgaagaccaggccagagcttctgcgatattgcaggtttctcactctg
gatccaaacacagtgaatgaagacatccatctgtctgagcgaaacagagcggctctaagc
actgaaacagtccagtcgtatcctgatcatccagacagatttgattgtgtgtggcaggtg
ttgtgtagagagagtgtgtgtggacgctgttactgggagattgagtggagtgctggtgat
ggtgtggatatatcagtgtcatataagagcatcagcaggaagggagacggtgatgagtgt
tggtttggatgtaatgatcagtcctggagtctggactgctctcctgacagttacttattc
atacacaataagatacagaccgctttccctgtagagtccatcatcaggaaaacaggagtg
tctgatgatgatgatgatgatgatgatgatgtcaggagaataggagtgtttgtggatcac
agagcaggaactctgtccttctacagtgtctctgacacaatgagcctcatccacacagtc
cagaccacattcactcagccgctctaccctgggtttggtgtttataaaggatcatcagtg
aaactgtgtgacctaacagcagagatggatacttga
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