Carassius gibelio (silver crucian carp): 127946336
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Entry
127946336 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127946336
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127946336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
Sina_RING
DUF1043
DUF4407
Uso1_p115_C
XhlA
Motif
Other DBs
NCBI-GeneID:
127946336
NCBI-ProteinID:
XP_052398807
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Position
A24:810881..821647
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AA seq
540 aa
AA seq
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MAEFRICQDEFMCPVCLDLLKDPVTIQCGHSYCKSCITDRWDQEDQKKVYSCPQCRETFN
PRPVLAGNTVLAELVKKLKKTKLAADCDAGAGDVQCDVCTGRKYKAVKSCLMCQESYCQT
HFDHHQEIHLRKPHKVIEATGRLQEMICQKHEKHLEMYCITDQQCICELCTKYEHKNHNT
VSAAAQRTEKQKQLKKTQKTLQQRIQQREKDLQQLRDTVESHKRSAQTAVEDSERIFTEL
IRSIERSRSELIRLIRDQEKTAVSRVEERLERLEQEINDLRRRDAELEQLSHTHHIQFLQ
SFQSLSAPPESTDINDNPFSCLVFSDDLRESVHQLRDKLEDFCKEELKKISDRDTITNIV
PRTRDDFLQYSRQFTLDLNTVNKRLRLSENNRVITNTGTVQPYPDHPDRFDVNQVLCRES
VCGRCYWELEWSGGVRIAVSYKSISRKGLDNKGLFGYNDQSWSLDYTSPRYSFGHNKTWT
DLPVKSISRRIGVFVDHSAGTLSFYSVSDTMSLIHTVQTTFTQTLYSGFLVGSGSSVTLC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattcagaatttgtcaggatgaattcatgtgtccagtgtgtctggatctcctg
aaggatccagtgaccatccagtgtggacacagttactgtaagagctgtattacagaccgc
tgggatcaggaggatcagaagaaagtctacagctgtcctcagtgcagagagaccttcaat
ccaagacctgttttagctggaaacactgtgctggctgaactggtgaagaaactcaagaag
accaaacttgctgctgactgtgacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaatacaaagctgtcaagtcctgtctgatgtgtcaggaatcttactgtcaaact
cattttgaccatcatcaggaaattcatttgcgtaagccacacaaagtgattgaagccact
ggacgactgcaggagatgatctgccagaaacatgagaaacatctggaaatgtactgtatt
actgaccaacaatgtatttgtgagctgtgtacaaaatatgaacataaaaaccacaacact
gtatcagccgcagcacagaggacagagaaacagaagcagctgaagaagacgcagaagaca
ctccagcagagaatccagcagagagagaaagatctccagcagctgagagacactgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgagctc
atccgctccattgagagaagccgctctgagctgatacgactgatcagagatcaggaaaaa
actgcagtgagtcgagttgaagaacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacatcacatccagtttctgcag
agtttccagtctctctcagcacctcctgaatctacagacataaatgacaatcccttcagt
tgtcttgtcttttctgatgatctgagagaatctgttcatcagctgagagacaaactggag
gatttctgcaaagaggagctcaagaagatctcagacagagacacaatcaccaacattgtt
cccagaaccagggacgacttcctacaatattcccgtcagttcactctggatctgaacaca
gtgaataaacgcctccgtctctctgagaacaacagagttattactaacactggcacagtc
cagccgtatcctgatcatccagacagatttgatgtgaatcaggtgttgtgtagagagagt
gtgtgtggacgctgttactgggagctggagtggagtggaggtgttcgtatagcagtgtca
tataagagcatcagcaggaagggattggataataaaggtttgtttggatataatgatcag
tcctggagtttggactacacttctcccagatactcatttggacacaataagacatggact
gatctccctgtgaagtccatcagcaggagaataggagtgtttgtggatcacagtgcagga
actctgtccttctacagcgtctctgacacaatgagcctcatccacacagttcagaccaca
ttcactcagacgctctattctgggtttttggttggttctggatcatcagtgacactttgt
tga
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integrated database retrieval system
