Carassius gibelio (silver crucian carp): 127950827
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Entry
127950827 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127950827
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127950827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
DUF4407
MRP-S31
PH_12
XhlA
Motif
Other DBs
NCBI-GeneID:
127950827
NCBI-ProteinID:
XP_052404116
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Position
B2:complement(31180496..31183804)
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AA seq
546 aa
AA seq
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MAEARVSQDEFMCPVCLDLLKDPVTVPCGHSYCKICITDCWDQEDQKRVYSCPQCRQTFS
PRPALARNTMLAEVLEKLKKTRLSADCEAGAGDVQCDVCTGRKYRAVKSCLVCLESYCQT
HFERHEEFHSRKPHKVTEVTGRLQEMICQKHEKILEVFCRTDQKCICLLCTIIEHKNHDI
VPAADQRTEKQKQLKETQKTLQQRIQQREKDLQQLRETVESHKRSAQTAVEDSERIFTEL
IRSIERSRSELIRLIRDQEKTAVSRAEERLERLEQEINDLRRRDAELEQLSHTQDHIQFL
QSFQSLSAPPESTDVNDDLFSSLFSSDDLRESVHQLRDKLEDFCKEQLQKISDRVTFTNI
DLWTRKDFLQYSHQFTLDLNTAYKHLRLSENNRVITYTDTDQSYPDHPDRFDVWCQVLCR
ESVCGRCYWEIEWSGDDGVFISVSYKSISRKGRGVECGFGYNDQSWSLCCSPSRYSFRHN
NIKTDLSVKPIIRRIGVFVDHGAGTLSFYSVSDTMSLIHTVQTTFTQTLYPGFTVYNLGS
SVKVKK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagagtttctcaggatgagttcatgtgtccggtgtgtctggatctcctg
aaggatccagtgaccgttccctgtggacacagttactgtaagatctgtattacagactgc
tgggatcaggaggatcagaagagagtctacagctgtcctcagtgcagacagaccttcagt
ccaagacctgctttagctagaaacaccatgctggctgaagtgttggagaaactgaagaag
accagactctctgctgactgtgaggctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaatacagagccgtcaagtcctgtctggtgtgtctggagtcttactgtcaaact
cattttgagcggcacgaggagtttcattcacgtaaaccacacaaagtgactgaagtcact
ggacgactgcaggagatgatctgccagaaacatgagaagatcctcgaggttttctgtcgc
actgatcagaagtgtatatgtctgctgtgtacgattattgaacataaaaaccatgacatt
gtaccagctgcagaccagaggacagagaaacagaagcagctgaaggagacacagaagacg
ctccagcagagaatccagcagagagagaaagatctccagcagctgagagagactgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgagctc
atccgctccattgagagaagccgctctgagctgatacgactgatcagagatcaggaaaag
actgcagtgagtcgagctgaagaacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccagttcctg
cagagtttccagtctctctcagctcctcctgaatctacagacgtaaatgatgatctcttc
agttctctcttctcttctgatgatctgagagaatctgtccatcagctgagagacaaactg
gaggatttctgtaaagagcagctccagaagatctcagacagagtcacattcaccaacatt
gatctctggaccaggaaggacttcctacaatattcccatcagttcactctggatctgaac
acagcatataaacacctccgtctgtctgagaacaacagagtgattacatacactgacaca
gatcagtcgtatcctgatcatccagacagatttgatgtgtggtgtcaggtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagattgagtggagtggagatgatggtgtgttt
atatcagtgtcatataagagcatcagcaggaagggacgaggtgttgagtgtgggtttgga
tataatgatcagtcctggagtttgtgctgctctccctccagatactctttcagacacaat
aacataaagactgatctctctgtgaagcccatcatcaggagaataggagtgtttgtggat
cacggagcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacaca
gtccagaccacattcactcagacgctctatcctgggtttacggtttataatcttggatca
tcagtgaaagtgaaaaagtga
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