Carassius gibelio (silver crucian carp): 127952924
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Entry
127952924 CDS
T08819
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127952924
03036 Chromosome and associated proteins [BR:
cgib03036
]
127952924
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127952924
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127952924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
DUF4718
Motif
Other DBs
NCBI-GeneID:
127952924
NCBI-ProteinID:
XP_052407788
LinkDB
All DBs
Position
B3:17766296..17824743
Genome browser
AA seq
1816 aa
AA seq
DB search
MEEKKKKKQEEKKKKEAAQKKAAEQKTKVPDSAKPSPTPPPPTNPSTATNPSVPSASSST
GGNGKRTPSGNQQQQPAAPRYPPREVPPRFRQHEHKQLLKRGQPLPAGSTALVQPVSTNP
TSQPFSCQTHPELPPQSGLAAQYENISPNRSATTAPTNSCSGWDPLIIDKHDTEAWPSIS
SKESHALAGCPLDTESISDISRMSMATGAGQQGHFSANHPSKANASHSGGLLSSQSGASR
GWGSGPSPSSGGEGKNEVSSTSVGARSWGSSNFNLNLNPNANPSAWPVLGHKGTGMGGGS
SGESNLPPPNLCSPPGTLPSQCPSSSGSIGGANGNSAGSGGSGNTTWGSIVPSDSSEPHS
IPSTNVSFSSEPQNLNTDGPNNTKQEPRSPGHSLPSWGVGPPGMCSFVQNSGGALQVNGD
EEPVWGNGDAKSGGGSKDSGWDSGSSWGQGGASGTSGWGQAASTGDWGKHSNTEAKGWDS
SSSPTQEQPLNSWVRGANAPASEGSSDSMECHPRRRVRSSTDEAPPILPAQDMDPRVLCN
TGWGQTPVRQHTAWETEEAARSNSKNDIGTEAWGSSSNAANVGPPPTSGSANPNSGTTSR
PDSGGKNEGPCPSGAAPGWGTAMPSPQASSGWADPTSNKKPSSGPGSWGSNPAGSSGGSL
QKSGQTWGSEEKSPTWEDSHTKAKPQGWTDVPKTSHGWSNGPSGESRPGGEWGESGDGKK
NGPTSSTWEGEGTSWNESSRGWGKPTPGIGGNWGDAQHSSGPSQGWNNKPQEGTSGNSGS
GNMGSWGGPNSVKQSGSGWGGGNGGGAKPDHIGEPTGWEEPSPHSIRRKMEIDDGTSAWG
DPSSYNKTVNLWDRNNPGMQGKPGPGNANSVPNNHHHHPHHNQPPMQTHSHGGPSSNNNH
ISPDNAVPHQTGPTHNRPTLMNPGWGETTNVHPKPEPSWGEPATPAASVDNGTSAWGKPQ
GGWGDNGPEVYGRGNGPPGSAPCKPAPKSMQDGWGGGEDMGLSAGQWEQDEGDMWNSTAS
QESNSSCNSWGNPPKKGPPKGKVPNKPDDTWIMNRLIKQLTDMGFPRDPAEEALKSNNMN
LDQAMTALLEKKTELDKRGMGISDYNNGLVNKPMGCRPSVISKESSSDRPPYLDKDAGLA
DDAQTSPFMPSPSLKLPLGSAALPGQSLGVAMQNLNNRQMQSGVFGSSGAAQARALQQQP
PPQPSVPPLNSSQPSLRAQVPQFFSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTLLN
QLYQLQLAYQRLQIQQQMLQAQRSVSGPIRQQEQQVARTINNMQQQIQQHQRQLAQALLM
KHQQQQQQPPASHPGLHPSAGKSALDSFPAHHQASSLSVSDLQTKEPQSSPNYSSPYPIS
GLNPNMNVNCMEVGGLSMKDSPQPQSRLSQWTHPNSMENLSGNSSPMEANFSKHGAISAG
PSLGPPSKPPLDDSYSPYNLIGSSESPASPLAPHDSWGPGKNTNDKISNGTNVTWPPEFC
PGVPWKGLQNIDPETDPNVTPGSVPSGPTINTNIQDVNRYLLRDRSGGKLSDMKSTWSSG
PISHTQASLSHELWKVPQGPRNTTAPTRPPPGLTNTKPSSTWGGNTLGLVAGWSSSYSAV
GTTWSTDSSNRSTSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKE
EAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLTPTTSWQANPGTNQTRLGGGG
TVATHPIGHWNSSGLGGGGAGGTGSGGKASNELLWGGVPQYSSLWGPPSTEDGRVVGSPT
PINTLLPGDLLSGESM
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaagaggaaaagaaaaagaaggaagctgctcagaaa
aaggctgctgaacagaaaaccaaagtgccagactctgccaagcccagccccacccctcct
ccccccaccaaccccagcaccgccaccaacccgtctgtgccctcagccagcagcagcact
ggtggcaatggcaagcgcacaccctccggcaaccaacagcagcagccggcagcccctcgc
tacccgccccgagaggtgccccctcgtttccgtcaacatgaacacaagcagctactgaag
cggggccaacctctgcccgccggaagtacagctctcgtgcagccagtgtccaccaaccct
acgtctcagcccttctcctgccagacccacccagagctgcccccacagagtggcctggca
gcccagtatgagaatatatcccccaatcgcagtgccactacagcccctaccaacagttgc
agcggctgggatccactgattattgacaagcacgatacggaggcgtggccttccatttca
agcaaagaaagccacgcccttgcaggatgccccttagacactgaaagtatcagtgacatc
agcagaatgagcatggccacaggagctggccagcaaggacatttctccgccaatcatccc
agcaaagccaatgccagccactcaggaggtctactctctagtcagagtggggccagcaga
ggctggggctctggcccgtctccttccagtggaggagaagggaagaatgaagtctccagc
acatcagtgggagccaggagttggggctcctctaactttaacttgaacttaaaccccaac
gccaacccctctgcctggccagttctgggacataaagggaccggcatgggtggtggcagc
tctggagaaagcaaccttcctcctcctaatctctgtagcccaccgggcactctgcccagt
cagtgccctagcagcagtggcagtataggtggtgccaatggaaattctgcaggtagtggt
ggcagtggcaacaccacgtggggtagcattgtgcccagtgactcctcagagccacactcc
atcccatccacgaatgtgtctttcagctctgaacctcagaaccttaacactgatggacca
aataacactaagcaagagcccagaagccctggccatagcctgcctagctggggagttgga
cctccaggcatgtgctcgtttgttcaaaattcaggaggagccttacaggtcaacggggat
gaagaacctgtttggggtaatggagatgccaagtctggtggtggctcaaaagactctggt
tgggactcagggagcagctggggacaaggaggggcctcgggcacttctggatggggacaa
gctgcctcaactggagactggggtaagcattccaacactgaggccaaaggatgggattcc
tcaagctctcccacccaagaacagccgctaaactcttgggtccgtggggccaatgcccca
gccagtgagggaagcagtgacagcatggaatgtcatcctcgccggagggtccgctcatca
acagatgaggctccccctattctgcctgcccaggatatggaccctcgggttctgtgtaac
acaggctggggacaaacaccagtgcgtcagcacaccgcttgggagaccgaagaagctgca
cgttccaacagtaagaatgacattggaactgaagcctggggctcgtcctcaaatgcagcc
aatgttggaccaccaccaacttctggaagtgccaacccaaactctggcactacatccaga
cctgactctgggggcaagaatgagggtccttgccccagtggagctgcacctggatggggc
acagccatgccatcaccccaggctagctctggttgggcagatcctaccagcaacaagaaa
ccttccagtggtcctggaagttggggcagtaacccagctggaagttcaggtggcagcctg
cagaaaagtggtcagacttggggttcagaggaaaagtctcctacatgggaagacagtcac
acgaaagccaaaccacagggatggactgatgtgcccaaaacttctcacggatggagcaat
ggacctagtggagaaagcaggcctggaggagaatggggtgaatctggagatggaaagaaa
aatggtcccaccagctctacctgggaaggagagggtaccagctggaatgagagctccaga
ggatggggaaagcctactccaggaataggaggaaactggggagatgcacaacactccagt
gggccatcacaaggatggaataacaagccccaggagggcaccagtggcaatagtggcagt
ggaaacatgggttcttggggaggtcctaactctgtaaagcagagtggctctggatgggga
ggaggaaatggtggaggtgctaaacctgaccacattggagagcccactggatgggaggag
ccctctccacactccatccgacgtaagatggagatcgatgatggtacctcagcttggggt
gacccaagcagttacaacaagacagtcaatctctgggacaggaataaccctggaatgcaa
ggcaaaccaggacctggcaatgccaacagtgtacccaacaaccatcatcatcatccccac
cataaccagcctcccatgcagacccacagccatggagggccaagttcaaacaataatcac
atttcccctgataacgctgtcccacatcaaacagggccaactcacaatagaccaaccctt
atgaatccaggatggggcgagacgacaaatgtccatccaaaacctgagccctcatgggga
gagccagccacccctgcagcaagtgtggacaatggcacttcagcatggggtaaaccccaa
ggtggctggggtgataatggtcctgaggtctatggtcgaggcaacggacctcctggatct
gccccctgcaaacctgcccccaaatctatgcaagatggctggggtggtggagaggacatg
ggcctgtctgcagggcagtgggagcaggatgagggtgacatgtggaacagcactgcatct
caagagagcaactcctcctgcaactcctggggcaacccacccaaaaagggcccaccaaag
ggaaaagtcccaaacaaaccggatgatacttggataatgaatcgtcttattaagcagctg
actgacatgggcttccctagagaccctgcagaagaagctctcaagagcaacaacatgaac
ttggatcaggccatgactgccctattggagaagaagaccgaacttgataaacgggggatg
ggaatctctgactacaacaacggcctagtcaataaaccaatgggctgcaggccttcagtc
atctccaaagaatcctcctcagatcgtcccccctacttggacaaggatgctgggctagca
gatgatgcccaaacctcaccgtttatgccttctccgagcctgaagctcccattgggtagt
gctgcactccctggccagagcctaggagttgcgatgcaaaacttgaacaacagacagatg
cagagtggagtgtttggtagtagcggagcagcacaagcccgggccctgcagcagcagccc
cctccccagccgtcagtgccacctctcaactcgtcccagcctagtctacgcgctcaagtg
cctcagtttttcagccctcaggttcaagcacagcttttacagtttgcagcaaaaaacatt
ggtctcaaccctgcacttttaacctcaccaataaaccctcagcatatgaccctgttgaac
caactttatcagctgcaactggcgtaccagcgtttacaaattcagcagcagatgttgcag
gcacagcgcagtgtttctggccccatccgacagcaagagcagcaagttgcacgtacaatc
aataacatgcagcaacagatccagcagcaccagcggcagctggctcaggctctgctgatg
aaacaccaacagcagcagcagcagccacccgcctcacacccgggcctgcatcccagcgca
ggcaaatcagctctggactcatttccagcccatcatcaagcgtccagcctctctgtttcc
gaccttcagaccaaagagccgcagtcttctccaaactactcctcaccctaccctatttcc
ggattgaaccctaacatgaatgtaaactgcatggaggtgggtggcctgtccatgaaggac
tctcctcagcctcagtcacgcctgtcacagtggacacacccaaactccatggagaacctc
tctggcaactcctctccaatggaggccaactttagcaagcatggtgccatctctgcaggc
cctagtctgggtcccccaagtaagcccccactggatgactcctacagtccctacaatctg
attggcagctccgagtctcctgccagccccctggcacctcatgatagctggggtccgggg
aagaacaccaatgacaagatctccaatgggaccaatgtcacctggcctccagagttttgt
ccaggagtgccctggaaaggactgcagaatattgaccctgaaactgaccccaatgtgacc
ccagggagtgttcccagtgggcccaccatcaataccaacattcaggatgtgaaccgctac
ctgctgagagacaggagtggaggaaagctgtctgacatgaagtccacttggtcttcgggg
cccatctcgcacacccaggcttctctctctcacgagctttggaaagtcccccaaggaccc
cgaaacacgacggctcccacacggccacctccaggcctgaccaacaccaagccctcttcc
acgtggggcggaaacaccctgggcctggtagctggctggagcagctcctactctgcagta
ggtaccacatggagtacagacagctccaacaggagcactagctggttggttctgagaaac
cttacaccacagattgatggttcgacactgcggacactgtgcatgcaacacggcccgctc
atcacattccatctcaacctgacgcagggtaacgcagtggtgcgctacagttctaaagag
gaggctgccaaagcccaaaagtccctacacatgtgtgttctgggaaacaccactatactg
gcagagtttgctggagaagaggaggtgaaccgcttctttgcacagggtcagtccctcaca
cccaccaccagctggcaggccaaccccggcaccaatcaaacacggctggggggcggaggg
acggtggccacacatcccatcggccactggaacagcagcggtctcggaggaggaggagcg
ggcgggacggggtccggcgggaaggcgagcaacgagctgctgtgggggggtgtaccgcag
tactccagcctgtgggggccgcccagcaccgaggatggccgagtggtgggcagccccacc
ccaatcaatacgctgcttcctggagacctgctgagcggagagtccatgtga
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integrated database retrieval system
