Carassius gibelio (silver crucian carp): 127958321
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Entry
127958321 CDS
T08819
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127958321
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127958321
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Helicases
127958321
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
127958321
NCBI-ProteinID:
XP_052413098
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All DBs
Position
B5:42939313..42948518
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AA seq
844 aa
AA seq
DB search
MAQRKKKLMRRKKRDHELQSDDEEFEVATQVRDDQDTSSRRLPRFPASSDCVSDVELDTR
ELVRAQNKKKKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMART
GSGKTAAFLIPMFEKLKAPQAQTGARALVLTPTRELALQTMKFTRELGKFTGLKTALILG
GDSMDDQFAALHENPDIIIGTPGRLMHVIQEMNLKLQAVEYVVFDEADRLFEMGFAEQLQ
EIIRRLPDTRQTLLFSATLPKMIVEFARAGLTEPVLIRLDVDTKLSDQLKLSFFHLRLDD
KAALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLTVEGIECAYIYSALDQTARKINIG
RFVHRKAMVLLVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVARAGRGGTAFSLV
CTDEVPYLYDLHLFLGRPVQLALPEHTPDADGVFGRVPQSILDDEESQLLTAHENSLDLQ
NLRRISENAYKQYLKSRPSPAPESIKRSRNTPLSSMSVHPLLGSGLEPMELDRLLMVDSI
KAYKAKSTIFEINSNNKSSASGVMRAKRSRDDRRLDKFSKARAERVIESVVPAVSRTEEE
EEEEDEDIQTVFSEVVGGKRRKKDDEADGPKSKKSKKTGKDEEFYIPYRPKDFNSERGLS
LGADAGSFEQQASSVVLDLMGDESNTLNQNKSLMKWDRKRKRFVRDTGKEEKNKKIRTES
GQVVTSKKRKKSFYEEWKKKYKIDDRDSDEETGGANRGRSFGGRRGRGGAPSQPAQQRSG
SGVRSELKNREQILKQRKRKAKQQFLQSGGMKKLRAKGRQRLGEVMRSGFGRGGFKKGKM
RKKL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaggaagaagaagctgatgaggaggaagaagagagatcacgagctccagtct
gatgatgaagagtttgaagtggcgacacaagtcagagatgatcaggacacatccagcaga
agactgcctcggttcccagcttcatccgactgtgtgtctgacgtggagctggacaccaga
gagctcgtccgagcccagaacaagaagaagaagaagtccggcggcttccagtccatgggt
ctcagttacccggtgtataaaggcgtcatgaagaagggatataaagttcccacacccatc
cagaggaagacgatcccggtgattctggacgggaaggatgtggtggccatggcccggaca
ggaagtgggaagacggcggcgttcctcatccccatgtttgagaagctgaaggccccgcag
gcgcagacaggggcccgggctctggtcctcacacccaccagagaactcgccctgcagacc
atgaagttcaccagagagctggggaagttcactggactgaaaacagcactcattctcggt
ggagacagcatggacgaccagttcgctgctcttcacgagaatccagacatcatcatcggt
actcctggtcgtctgatgcacgtcatccaggagatgaacctgaagctgcaggccgtggag
tatgtggtgtttgatgaagctgacaggctgtttgaaatgggtttcgctgagcagcttcag
gagatcatcagacgtcttccagacactcggcagacgctgctgttctccgccacgctgccc
aaaatgatcgtggagttcgccagagctggcctcacagagccggtgctcattcgtctggat
gtggacaccaaactgagtgaccagctgaagctgtccttcttccacctgcggttggatgat
aaagcagcgcttctgctgcatctcctgagaaacgtagtgaagccgcaggagcagaccgtg
gtgttcgtagccaccaaacatcacgtggagtatctcaaagagctgctgacggtcgagggc
atcgagtgcgcctacatctacagcgctctggaccagacggctcgtaagatcaacatcgga
cgcttcgtgcaccgcaaggccatggttctgctggtgacggacgtggcggcccgcggcatt
gacatccctctgctggacaacgtcatcaactacaacttcccgtccaaggccaagctcttc
ctgcacagagtcggtcgtgtggcccgcgccggccgaggaggaaccgccttcagtctggtg
tgtactgatgaagtgccttacctctacgacctgcatctgttcctgggtcgacccgttcag
ctcgccctccccgaacacacaccagatgctgatggggtgttcggccgtgttcctcagagc
atcctggacgatgaagagtcgcagctgctgacggctcacgagaactctctggatctccag
aacctccggcgcatctccgagaacgcttacaagcagtacctaaagtctcgtcccagcccg
gcgcccgagtccatcaagcgctccagaaacaccccgctgtcctccatgtctgtccaccct
ctgctgggttctggactggagccgatggagctggaccggctgctcatggtggactccatc
aaggcctacaaggcgaaatctactatctttgaaatcaactccaacaacaaaagcagcgcc
agcggcgtgatgcgagccaagcgctcacgagacgatcgacggctcgacaagttttctaaa
gcgcgagcggagcgggtcatcgagtctgttgttccagccgtgagcagaaccgaggaagag
gaggaggaggaggacgaggatattcagactgtgttctccgaggtggttggagggaaaaga
cgaaagaaagatgatgaagcggacggaccgaagagcaaaaagagcaaaaaaacaggaaaa
gatgaagagttttacatcccatacagacccaaagacttcaactctgagcgcgggctcagt
ctcggcgctgacgccggctctttcgagcagcaagcctcttctgtggtcctggacctgatg
ggagacgagagcaacacattaaaccagaacaagagcctgatgaaatgggatcgcaagagg
aagcgcttcgtccgagacaccggcaaagaggaaaaaaacaagaaaatcaggacagaaagt
ggacaggtggtcaccagcaaaaagaggaagaagagcttttatgaagaatggaagaagaaa
tataagatcgatgacagagactcggatgaagaaactggaggagcaaaccgaggaaggagc
tttggaggccgcaggggacgaggaggagctccatcacagccggctcagcagcgcagcgga
tcaggtgtacgatccgagctgaagaaccgcgagcagatcctcaagcagcgcaaacgcaag
gccaagcagcagttcctgcagagtggaggcatgaagaagctccgtgccaaaggaagacag
cgccttggtgaagtcatgagatctggctttggtcgcggcggcttcaagaaaggaaagatg
aggaagaaactttaa
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