Carassius gibelio (silver crucian carp): 127959905
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Entry
127959905 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127959905
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127959905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127959905
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127959905
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127959905
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127959905
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127959905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
127959905
NCBI-ProteinID:
XP_052415294
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All DBs
Position
B6:complement(13929037..13961886)
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AA seq
859 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCLNSFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGALPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSPYKKQESDSWEEEIQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKKTNFPLAVK
LDTITPDGADVYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQPRVSDWE
VIQEAGLKLKPVYGSGYTGIKNLANSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVVKEEHKQQQRGISPKMFKALVSKGHP
EFSSNRQQDAHEFLLHLINLVERNSSGSENPSDVFRFLVEERVQCCQTQKVRYSQRVDYL
MQLPVPLEAASNREELIAYESKRKEAEENMRPPPEPVRARIPFTACLQAFTEPENVPDFW
SSALQAKSAGVKTSRFASFPEYMVMQIKKFSFGVDWVPKKLDVSVDVPDFLDLNRLRATG
LQTGEEELPDLTPPIVIPEDTRDSTTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAVPTYMEPDLPSPSLPTTSALDNQPPEESISILTS
MGFPRHHTIQALKATSNNLERALDWIFTHPDCEDESEAMSDTADTEANDNSFSNANAHSD
SSLSPDQDLSSPRVRDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWLIYNDHKVCLS
ERPPKDLGYMYFYRRLSSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatctgggagagctactggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagcgaatgcgctttttcctacgactctcctgaatcggaa
ggaggtctgtatgtgtgtttgaactcattcctgggtttcggaagagaacatgtggagaga
cattaccgtaaaactggacagagtgtgtacatgcacttaaaacgacacgtgaaagagaaa
gccacaggtgctgcagggggtgccttaccaagaagaaggaacggaaaagtatttttagat
ttagagcttaaccgtgattttaacggagatgattatgagtatgaagatgaagccaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggagttgcccgcactg
gtgacaatagcctgtgatgctgtcctcaatgctccgtctccatacaaaaagcaggaatct
gattcatgggaagaggagatccaagtatctaaacatgccagaagtctcagacagcaggag
aatggggttcgaattcctcccagcggctggaagtgcgccaagtgtgaaatgagagagaac
ctgtggctgaacctgacggatggctctgtcctctgtgggaagtggttctttgatgggagc
ggagggaacggacatgcccttgagcactacaaaaaaaccaacttccccctggcagttaaa
ctcgacacaatcaccccagatggagcagatgtttattcgtttgacgaagaagaagcagtg
cttgatcctcacatatcagaacatttgttacactttggaatagatatgctgcaaatgcaa
aggacagagaatggccatcatacagacaaccacgtccagcctcgtgtgagtgactgggaa
gttattcaggaggcgggtctaaagctaaagcctgtctatggctcaggatatacaggcatc
aaaaacctggccaacagctgctacctgagcaccacaatgcaagtgcttttcagtattcca
gagttccagagagcgtatgttggcaacctacagagaatatttgactactcaccccttgat
ccaactcaggatttcaacacacaaatggcgaaactcggtcatggacttctgtcaggccag
tactcaaaacctccaatgaaatcagaacttattgaacaggtggtgaaagaagaacacaag
cagcagcaaagagggatttcccctaagatgtttaaagcgctggtcagtaaaggacaccca
gagttctcctcgaaccggcagcaagatgctcatgaattcttgctgcacttaattaacctg
gtagagaggaacagttcaggctcagagaaccccagcgatgtgttccgcttcttagttgag
gagcgagtgcagtgctgtcagacacagaaggtgcgctactcacagcgagtggactacctc
atgcagcttcctgtacccttggaggctgccagcaacagagaggagttaatagcatatgag
agtaagcgtaaggaagctgaggagaacatgcggccccctccagagccggtgagagcccga
atccctttcactgcttgtctgcaagccttcactgagcctgagaatgttccagacttctgg
agctctgcactgcaagccaagtcagccggagtgaagacttctcgtttcgcatccttccca
gagtacatggtcatgcaaataaagaagttctcattcggggttgattgggtgcccaaaaag
ttagatgtttctgttgatgtacctgatttcctggacttgaatcgcctccgggccacaggg
ctacagactggagaagaggagctgcctgaccttacacctcccattgtcattcctgaagac
accagagacagtacaacaaacaactctttggaatctccagaaatagatgaatcatccgtg
atgcagctggcggagatgggtttccctctggaagcctgtcggaaggcagtgtactacact
gggaatatgggggcagagatggcctttaactggataatagcacacatggaagagccagat
tttgctgagcctctggcagttcccacttacatggaaccagacctgcccagccccagcctc
cctacgaccagtgcactggacaaccagcctccagaagagagcatctccatcctcacctcc
atgggcttccccagacatcacacaatccaggctctcaaagccacaagcaacaacttggag
cgtgcgcttgactggatattcacacacccggactgtgaggatgagagtgaggctatgtca
gacaccgcagacacagaggcgaacgataacagcttttcaaatgccaatgcgcacagcgac
tcctcactgtctccagatcaggacttgtccagcccccgtgtcagagacggacccgggcgt
tacgaactgtttgccttcatcagtcacatgggagcatccacaatgtctggtcattatgtg
tgtcatatcaaaaaagagggcaggtggctgatttacaacgaccacaaagtatgtttgtca
gagaggccccctaaagacttgggctacatgtacttttaccggcgcctgtcaagctgctag
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