Carassius gibelio (silver crucian carp): 127960013
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Entry
127960013 CDS
T08819
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127960013
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127960013
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
PDZ
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127960013
NCBI-ProteinID:
XP_052415535
LinkDB
All DBs
Position
A1:4010109..4041962
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AA seq
1493 aa
AA seq
DB search
MHADRMASYVDNSFRHAIIKNPVERTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRY
EQHEANEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEAS
EMIVVDYVDDNDEYFQRQASHRQSRRRFRKINQCGERQTIIDTVDHYPVSKPPLPPGQHS
ECSKSQLPTDISKPHPSDSCHSHITSSQSRSSIASDSGSSSLSDIYQATESECGDMDLSG
LPETAVDTDEDDDDEDVGRGSDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFVQQLPAFA
SLSVSVRRELCAVMVFAVVERARTIVLNHGEELDSWSVILNGAVEVTYPDGGSESVCMGG
SFGVSPSMEKQLMTGVMRTKVDDCQFVCIAHEEYCSILNQVEQNTQRVEEEGEIVMVKEH
RELDRTGTRKGHIVVKGTAERLMQHLVEDHSVVDPTYIEDFLLTYRTFLPSPLILGQRLL
DWFNDSSYRDKVTRVVLLWVNNHFSDFEGDPDMSSFLEEFQSNLEREKMTGQLRLLNIAC
AAKAKPRVITINRPAREMPLPFTLIGGAERGTRLFISGVEVGSKAEEAGLKRGDQILEVN
GQTFENVQLPKAVEILRNNTQLCMSVKTNLLVFKELVARVAEERKNGIPHLPKIGDGKKN
SRYSVAELAADSDLIGQEKVNRKVKAHTVGGRNKLMKILDKTRMSILPQKPYSDLGLGQT
QDDSIVGLRQNKQTPPTMAVSGNLSSSNPDLAPGQQRIIDYSTQPPELQDQVLRVFKADQ
QSRYLLINKDTTAREAANQAMREFGLTASPEAYSLCEVSVTQEGVIKQRRLPDQLSKLAD
RIQLSARYYLKSNMETETLCSDVEAQEMQRESVVPLLSLSSMEIANQLSARNYLRFSGIE
PTDYITDLFKLRPQEPPTNLRNFEDLVNQETFWVATEVVQEANLAKRVKIIKHFIKIALH
CRDCKNFNSMFAIISGFNLAPVSRLRSTWERLPGKYEKLLAELQDVFDPSRNMAKYRNLL
NKHNLQPPVIPLFPVIKKDLTFLHEGNNSKVDGLVNFEKLRMIAREIRHVVRMASITMDP
ALLFKTRKKKWRSLGSLSQVSSSSLSDIGTMGGKRKGRRSSFLSTKKLYEVEMMSRRVRQ
YLDTHTHESDEDKLQKLSLQCEPANNSMLKNSSERKRVDVSPVGQRSTTPQQTNGNHGRR
KSLGKELPPFGAQSPQSLHKILSLSEEGRDRHRKPPEDSRFLLSSPRTSPRSTPRKGPRL
VVSDAPDKLSLLSSSSSDLIMVDDHRHAQPHTLTHPLSTRRAEPDQISLGSYSLTPDQCD
RASLDAADSGRGSWTSCSSGSHDNIQSIPQRVGYYDNRSWETLSDGMGRSHMTTPTGHWG
DELEGDTGTIKRRGGKDETPNTNKNAASRREGRFRELPPTPPGYTALSLAEADSHSHAHG
RRPPDYTAALQRSRFLKRSCDPPPHPSSRLPAYNHCQSPPRPQPEENEQISAV
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggacagaatggcgtcatatgtggacaatagtttccgtcacgcgatcatcaaa
aatcctgtcgagagaacgcaacaggatctccagatcgtgtactcgtacctccatgggatg
gaagcactgtccaatttaagggagcaccagcttaggttgatgtgtgagacagttcgatat
gaacagcatgaagctaatgaggttttatactatcctgatgacattgggagctgctggtat
atcctgctgtctggctcagtctttataaaggaatccatgtttctgccccgcagcagtttt
ggtaagcgttctgcgggtagtttgcgtcgtggttgtgagtgtatcgtcctcgaggcttct
gagatgattgtggtggactacgtggatgacaacgatgagtatttccaaagacaagcatct
catcgtcagtccaggagaagattccggaagataaaccagtgcggagagcgacagactatc
attgatacggtcgatcattatccagtcagcaagccccctctgcctccaggacaacactcg
gaatgctccaaatcccagcttcctaccgacatctcaaagccacacccctctgacagttgc
cactcccatatcacttccagccaatcacgttccagcatcgccagtgattcaggaagtagc
agcctatcagatatttaccaggccactgagagtgaatgtggagacatggatctgagcggg
cttcctgaaacagcagtggacacagatgaggacgatgatgatgaagacgtagggagggga
tcggaccctcttatgagtcgagatattgtgagagactgtctggagaaagatcctatggac
cgtacagatgatgacattgagcagttgttggagtttgtgcagcagcttccggcttttgcc
agtctgagtgtttcggtgaggagagagctgtgtgccgtcatggtgtttgcagtcgtggaa
cgggccagaaccatcgtactcaaccacggggaagagctggactcatggtcagtcattctg
aatggagcagttgaggtgacctacccagacggcggcagtgagagtgtgtgtatgggtgga
agttttggtgtctccccttctatggagaaacagctgatgactggagtcatgaggaccaaa
gtggatgattgtcagtttgtgtgtattgcgcacgaggaatactgctccattctgaatcag
gttgagcagaacacacagcgagtggaggaggaaggagaaatcgtcatggtgaaagaacac
agagaactcgaccggacgggaacccgcaagggacacattgttgttaagggcactgctgag
aggctgatgcagcacttagtggaggaccattcagttgtcgaccccacatatatcgaggac
ttcctgttgacctatcgtaccttcctgcccagtcctctgattttgggacagagacttctg
gactggtttaatgactccagttaccgggataaggtgacccgagttgtgttgttatgggtc
aacaatcacttcagtgacttcgaaggagatcctgatatgagcagttttttggaggagttc
cagagcaatctggaaagagagaaaatgacgggtcagttgcggttacttaacatagcatgt
gctgctaaagccaaacccagagtgattaccataaataggcctgctcgagagatgcccctc
cccttcactctcattggaggagctgaacgaggaacacgcctctttatcagcggcgtggaa
gtcggtagcaaagcagaagaggcggggcttaaacgtggagaccagatattggaggtgaac
gggcagacgtttgagaatgtgcagttgcccaaagcagtagaaatcctcaggaacaacaca
cagctctgtatgagtgtcaaaaccaacctcctggttttcaaggagttggtggccagggtg
gcagaggaaaggaaaaacggcattcctcatcttccaaagattggtgacgggaagaaaaac
agccgttattctgtagctgaacttgccgctgattcggatctaataggtcaagaaaaagtc
aacaggaaggttaaagcacatacagtgggcggccgaaacaaactcatgaagattctagac
aagacacgcatgagcatcctacctcagaaaccttacagtgacctcgggttagggcagact
caggatgacagcattgtgggattacggcagaacaaacagactccgcccactatggctgtt
agtggaaatctctcatccagtaaccctgacctggctccaggccaacaacgcatcatcgac
tacagtacacaaccaccagaattgcaagaccaggtgttgcgtgtttttaaggcggaccag
caaagtcgttacttactgatcaataaggacaccacagcaagagaagcggccaatcaggcg
atgcgagagtttggcttgacggcgagtcctgaagcctattcgctctgcgaggtgtcagtc
acccaggagggagttatcaaacagagacggctgcctgatcagctctctaaactggccgac
aggatacagctgagtgccaggtactatctgaagagcaacatggagaccgagacgctgtgt
tcagatgtggaggcccaggagatgcagcgggagtctgtggtccctctgttatccttgagc
tctatggaaatagccaatcagctgtcagcgcgcaactatctgcgcttctctggcattgaa
ccgacggattacatcactgacctcttcaagctccgcccacaagagcctcccaccaacctg
cgcaactttgaggatcttgtgaaccaggagaccttctgggtcgccacagaggtagtacag
gaagccaacctggccaaaagagtgaagatcatcaagcactttataaagattgcccttcac
tgccgtgactgcaagaacttcaactctatgtttgccataatcagtgggttcaatctagct
cctgtctctcggctgcgatccacatgggaacggttgcctggaaaatatgagaagcttttg
gcagaattacaagacgttttcgacccttctcgcaacatggccaaataccgcaacctcctc
aacaaacacaacctgcagccgcccgtcatccctctgtttcctgtcattaagaaagacctc
actttcctccacgaggggaacaactccaaggtggacggtctggtgaattttgaaaagctg
aggatgattgcacgagagatccgacacgtggttcgaatggcttccatcaccatggaccct
gcattgctttttaagaccaggaagaaaaagtggagaagtcttgggtctctaagtcaggtg
agcagctcttctctctctgacatcggaacgatgggcgggaagaggaaggggaggcggagc
tcttttctcagcactaagaagctgtacgaggtggagatgatgagcagacgcgttcggcag
tacctggacacacacacacatgagagtgatgaagacaagctccaaaaactctctctgcag
tgtgaacctgccaacaactccatgctgaagaactccagcgagaggaagcgagtggatgta
tctcctgtcggtcagagaagcaccactccgcagcaaacgaatggaaatcatggacgcagg
aaatctcttggcaaagagttaccgccatttggtgcccagtctcctcagtctctccataag
atattgtctctctcagaagaggggcgggacagacaccgaaagccgcctgaggacagccgg
tttctgctctcctctccacgcacctcacctcgcagcacacctagaaaaggcccacggtta
gtggtgagtgatgcaccggataagttgagtttgttaagctcctcctcctctgacctcatc
atggttgatgaccacaggcacgctcaaccccatacgcttacacacccactcagcacgcgt
agagctgaacccgaccagataagcctcggatcctactccttgactccggatcagtgtgac
cgtgcatcgctggacgcagcagacagcggccgtggaagctggacgtcctgctccagtggg
tcacatgacaacatccagagcattccacagcgtgtgggttattatgacaaccgcagctgg
gagacgctgtcagatgggatgggacggagtcacatgaccacacccaccggtcattggggc
gatgaattggaaggagacacgggaacgataaaacgcagaggtggaaaagacgagactcca
aacacaaacaagaatgctgcgagtcggagagagggtcgttttagagagctgccgcccaca
ccacctggttatactgcgctgtcattggctgaggcggacagccacagtcatgcgcatggg
cgacgcccaccagactacacagcggctctgcagagatctcgattccttaaaaggtcatgt
gatcctcctccacacccatccagtagactgccagcatacaaccactgccagtcaccacca
cgaccacaacctgaggagaatgagcaaatatctgcagtttaa
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integrated database retrieval system
