Carassius gibelio (silver crucian carp): 127960035
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Entry
127960035 CDS
T08819
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127960035
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127960035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
127960035
NCBI-ProteinID:
XP_052415525
LinkDB
All DBs
Position
B6:4202261..4237776
Genome browser
AA seq
2929 aa
AA seq
DB search
MKIQKKDKQMSATHVLKHTPSAAASNASDQNAQTTFPIGLLGKEQLRIIGGPPNHCMAHP
KHSGLREAGPVASSHSLRPLSINSEEDDGGGGTRVKKKRRKKDKKESEWHKDEESNAKPK
RREQKERKELLARKAKEAKEQKDHKKREPKAQKEVKKVKKGQDVKVKTQAKNTATHQPSK
RGRKPKEQGAMPPEKKKKGKRKSDAVLEMVESDDTTSLSTLATGEESIDPMDNTKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGSGRIAAMSSSTLAWQAEEPPEDEANIIEKILAV
RTVKKETSLDEPQEEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMK
HIFTEPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDVD
PVKIREFEDLKQIPEIKHVERPLPEQWQKLEKSRDYRNGNQLREYQLEGMNWLLFNWYNR
KNCILADEMGLGKTIQSITFLYEMFLMGLRGPFLIIAPLSTITNWEREFRTWTEMNVIVY
HGSQISRQMILQYEMYHRDEQGNIVSGQFKFHGIITTFEMIMADCPELKKINWRCVVIDE
AHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETTFLEEF
GDLKTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF
AFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFKKTYSSEAADFQLQAMI
QAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQ
AAIDRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQS
KAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKLEVEDLLRKG
AYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDD
PNFWQKWAKIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERP
CRTRRLSDRNRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLTERDMEVLCRALLV
YCVRHYKGDDKIKSFIWDLITPTKDGHNQALQNHSGLSAPVPRGRKGKKLKNQLSPPELK
NADWLVHCNPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKVEVLGEAADQALEGIPSSK
LEVTLPDIDYIEIPTIWWDAEADKSLLVGVHKHGYERYNAMRADPALCFLERVGMPDVTA
LTVEQSGAETASDAPDSISKSDEIKEENDIKSEELEEKVEIKEEPMSEETGKNEIAVTGG
FIGSLAGDLVAEVMEQGRIQWPAGTALTARLRRLITAYQRYTRREPLRHDFLLHEGIAPV
AWQIGEFRHCTTEPDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPEKKTFDWNQFRALA
RLERKTDESLERYFHSFVSMCRTACRLPPRKDEGNVDPSLFVEPITEERAARTLYRIELL
RKVREQVLRHPLLGARLQLCRPSLYLPVWWECGKHDRDLLIGVAKNGLSRTDFYILNDPQ
LSFLEAHRNYVHKENHRYSVPGLPHHHCCLYDANLGHCQSPQPPEYHPTPSHHTPTQLIH
THGHHQPTEVVASESGSSLGIGTGNREGFLDCPPLDDSLELGSLQHEGLTSDTLHGKSGK
EAFNGFPFNSATGGQNMLNSYGVQGELNGSQGDMVDSIAGKLRSDVLVGEQGSSEETGLM
APSVELDELQTPWETSDHAETSDMFNETDPILGAPTLEPSFLDAPQPEDGREGDETLTDC
LSMPSSDSQSNPVEPLAPSFMLFKDLNVGETSVDPTDLSASLPEYVPPTPLGLPDVSLDQ
TDPISEEQEDKLSDSNITFGVPSPEEGAESVGFNFEKEDLSPDSPKTKDTQDEIDNMPLI
ESTRVSDSNGDLKDPCEAVLEEPYEKPLTEPEKVPLEESYDLTCDETLQEPCEGFQQDTV
EQQLVEETCKEPPEPIEECNLTNTTLSTDYPMPPSLPSSPTTLPDTSVSPGLDAVPKQEF
LVDPVVSDVKPEPDSTTQTPHLEQTEALEVKDKIKDEGAKAPALLGDVDGPHFALPMCEM
ADSVHEIREPTIAQLLQEKALFSFSEWPKDRVIINRIDSICHTILKGKWPSSSQQYESPT
SLANTCVPSSAHQRAGFLPTRMPISQSLNFNLSHTVPHLPKERLVAPAFLPELKRPRRGF
EFEAEVLAKPSQLGEKIQVGVPHRANALLLNGWQDAAIDLSKPTELTVGGDSGSIGQMSH
TVQSAPHKITGIGSIQGSLGLDMAGILQAGLIHPVTGQIVNGSLRRDDSMLRRRRGRRRN
VETPDLSFIKGQNMNLPEQQSGSESISHPVVSSTSSQSEGPPATPTTLPTPPAAPSPAPP
PASETLNVSMDREMANKGLMEWLRQNPNYNMELSAFPNANLLHSFLERPKQRRHRCKDPS
KLDINSLTGEERVPVVHRNTGRRLGGAMAPAIKELSRWLDANSDYSVAPDWADVVKHSGF
LPEGKFTRILSGPVCRDPGPRRRGRRPRSEMPKAPELTAGMGPLFMNGGLIGSMDQVSLP
NLRNVPGIPLTGIMGFPHGFATAVLSGEDAKNGLSMLPMMLHGMAVQPPMYSAHMSGMIN
QQLSTTTSTASASSTSASVTSTNSATVTSTSSPADSSESTPQCENASSPMSTENGNKEDA
KQGGEEKKVSASVSTAAATSSSSSSSSITSTGSHLTFNPFLIPGMSHSLLYPHMFLPPGS
IMALPAMPAADSTGSPKRKRKKVREEGAEEGSGNVVVESKGVKDEQTLEQKSQEGGMEDG
RPDVDLAPVKDPSDPIKAPSEDKSTEEKDKNELGEETESNAQGSCDGGD
NT seq
8790 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacaaaagaaggacaagcagatgtctgccactcatgtacttaagcacactcca
tccgctgctgcctcgaatgcctctgaccaaaacgcacaaactacatttcccatcggcctc
ttgggcaaagaacagttacggatcattggaggaccgcccaatcactgcatggctcaccca
aagcactctgggttacgggaggcagggcctgtggccagcagtcacagtctccgcccctta
tcaatcaacagcgaggaggacgatggagggggcgggacaagggtgaagaagaaacgaagg
aaaaaagacaagaaagaatcagagtggcacaaagatgaagagagcaacgctaaaccaaag
agaagggagcaaaaggaacggaaggagcttcttgcaagaaaggcaaaggaggcgaaggaa
caaaaggatcataaaaagagggagccaaaagcccaaaaagaggtcaaaaaagtcaagaaa
ggtcaagatgtaaaagtgaaaacacaggccaagaacactgcaacacatcagccctccaaa
agagggaggaagccaaaagagcagggtgccatgcctccggagaagaagaagaagggaaag
aggaaaagtgatgctgtacttgagatggtggagagtgatgacacaacctctctcagcacg
ctcgccaccggtgaggaaagcatcgaccctatggataacactaagaggcgatcagggcgt
caagtgaagcggcggaagtataatgaagatcttgatttcaaggtcgtggatgatgacggg
gagaccatcgctgtgttgggctcgggacggattgccgccatgtcttcctctaccctcgcc
tggcaggctgaggaaccccctgaagatgaggctaatatcattgagaaaatactggcagtg
cgaacggtcaagaaagagacatcccttgacgaaccacaagaagagatggaggagttttac
gtcaagtacagaaatttctcctatctgcactgtaaatgggcgaccttggaggaactggag
aaggacccacgcattagccaaaaaatcaagcgcttcagaaacaagcaggcgcaaatgaag
cacattttcacagagccggatgaagacctgtttaatccagattatattgaggttgatcgg
gttttagagatcgctatcaccacagatacagaaactggagaggaagttacacactacctg
gtgaaatggtgctctttgtcatatgaggagagcacttgggagcttcaggaagatgttgac
cctgtgaaaatcagagagtttgaagacctaaagcaaattccagaaatcaagcatgtggaa
aggcctctccccgaacagtggcaaaaactggagaagtccagagattacaggaatgggaac
cagctgcgagaataccagttagagggaatgaattggctccttttcaactggtacaacagg
aaaaactgtattctggctgatgaaatgggacttgggaagaccatccagtccatcacgttc
ctctatgagatgttcctcatgggtctaaggggaccttttctcatcatcgccccgctctcc
accatcaccaactgggagagagagttccgcacatggactgaaatgaacgtcatcgtctat
cacggcagccaaatcagtcgacagatgatcctgcagtatgagatgtaccaccgagatgaa
cagggaaacattgtgtctggtcagtttaagtttcatggcatcatcactacatttgaaatg
ataatggccgactgtccagagctgaagaagatcaactggcgctgtgtggtgatcgacgag
gcccatcgcctaaaaaaccgcaactgtaaactgctggagggactcaaactcatgaacctg
gaacataaagtccttctgacaggaactcctttgcagaactctgttgaggaactcttcagc
ctgcttaactttctcgaaccctcacagttcccttccgaaaccacttttctagaggagttt
ggagacctgaagacagaagagcaggtaaagaaactgcaagccattctgaagcccatgatg
ttgaggagactgaaggatgatgtggagaagaatttggcccctaaacaggagacgatcatt
gaggtggagctcactaatattcagaagaaatactaccgtgccattctggagaaaaacttt
gccttccttgccaagggagcaaaccagcacaacatgcccaacctcatcaacacgatgatg
gagcttcgcaagtgctgcaatcacccgtacctcattacaggtgctgaagaaaagatcctt
gagagcttcaagaaaacctacagttctgaggctgcagattttcagctgcaggcaatgatc
caggctgctggtaaactagtgcttattgacaagttgctgcccaaactgctggccggagga
cataaagtgctggtgttttcccagatggtccgttgcctggatatactggaggactacctc
attcagaggaggtatacgtatgaacgtattgatgggagagttcgagggaatctccggcag
gctgccatcgatcgcttcagtaaagtggactctgaccgcttcgtgttcctcctctgtaca
cgagcaggaggtctgggcatcaacctcaccgccgccgacacgtgtatcatattcgactcg
gactggaacccacagaacgacttgcaggctcaagcgcgctgccaccggatcggtcagagc
aaagcggtaaaagtatatcgccttattacacgaaactcatatgagagggagatgtttgac
aaagccagtttgaaactaggattggacaaggctgttctgcaggacatcaaccgcaagggc
agtctcaatggggttcagcagctgtctaagttggaggtggaagatcttctcaggaagggt
gcgtatggtgctcttatggatgaggaagatgagggctctaaattttgtgaggaggatatt
gatcagatcctgcagagacgcacacagaccatcacaatccagtctgaggggaagggatca
acttttgccaaggctagctttgtgtcttcagggaatcgtacagacatttctttggatgat
ccaaacttctggcagaagtgggccaaaattgctgaactggaaattgactcaaaggcagaa
aaggagagtctggtgatcgacacccctcgcgtacggaagcagacgcgtcactataattcg
tttgaggacgacgaactcatggagttctctgagctggatagtgactcagaggaacgaccc
tgtcgcacaagacgtctcagcgatcgcaacagacgctacctccgagcagagtgcttcaga
gtggagaaaaaccttctcattttcgggtggggtcgctggaaggatattctcaaccatggg
cgttttaaatggcacttgacggaaagagacatggaggtgctgtgcagggctcttctggtg
tactgtgttcgccattataagggagacgataaaattaagagcttcatctgggatctgatc
acacccaccaaagacggacacaatcaagcactacaaaaccactcaggtctgtctgctcct
gtcccacggggtcgtaaaggaaagaagctgaagaaccagttgagtccccctgagctgaag
aatgcagactggctggtccactgtaacccagaggttgtgcttcaggacgacagctacaag
aaacacctcaaacaacactgcaacaaggttctcttgagggtgcggatgctgtactatttg
aaggtcgaagtgctgggggaggctgctgaccaggctcttgaagggatcccatccagtaaa
ctggaggtaaccctccctgatattgactatattgaaatacctactatatggtgggatgct
gaagcagataaatcgctgcttgttggagttcacaaacatggatatgagcggtataacgcc
atgcgtgcagaccctgctttgtgtttcctggagcgagtgggtatgcctgatgtcactgca
ttgacggtagaacaaagtggagcagaaactgcttcagatgcacctgatagtatcagcaag
agtgatgaaatcaaagaggagaatgatattaagtctgaagaattagaagagaaagtagag
atcaaggaggaacccatgtcagaggaaacgggaaaaaatgaaattgcagtgacggggggc
tttataggatctctcgcaggagaccttgttgcagaagtgatggagcagggacggatacag
tggccggcaggcacggctcttacagcacgtctgcggcgcctcattactgcctatcagcgt
tatacacgacgtgagccgcttcgtcatgactttctcttacatgagggaattgcacctgtg
gcctggcaaataggagagtttagacactgcactactgagcctgacccactctttttagag
tggcagcgaaggtggacacgtcgagagcaggctgacttctatcgcacagtgtcctcgttt
ggagtagtgtatgacccagagaagaagacttttgactggaaccagttccgtgcccttgct
cgattggagaggaagactgatgaaagcttagagagatatttccacagctttgtttcaatg
tgtcgaactgcatgtagactgccgcccagaaaagatgaaggtaacgtggatccttcactg
tttgtggagcccattacagaagagcgagctgcccgaacattatatcgtattgagcttttg
agaaaggtccgtgagcaagtattgcgtcacccgctcctcggggcacgactgcagctttgt
cgtcctagcttgtatttgcccgtctggtgggagtgtggaaaacacgaccgtgatctgctc
attggggtcgctaaaaatggattgagtcgaactgatttctacatcctcaatgacccccaa
ttatccttcctggaggcccaccggaactatgttcataaagaaaaccacagatattcagtc
ccaggcttgccccaccaccattgctgcttgtatgatgccaaccttgggcattgtcagtcc
ccacaacctccagagtatcaccctacaccttcacaccacacaccaacacaactcatccat
actcatgggcatcatcagcccacagaagtggtggcatcagagtctggaagttcccttggg
ataggtacaggaaatagggaaggatttttggattgtcctccactggatgattctctggag
ttggggtcattacaacatgaaggcttgacatcagacacactacatggcaaatctggtaaa
gaggccttcaatggattcccattcaattctgcaacaggtgggcagaatatgctaaattcg
tatggtgtgcaaggggagttaaatgggtctcaaggagacatggtggactccatagctggg
aaacttcgcagcgatgttcttgtgggagaacaagggtcctcagaggagactggcttaatg
gctccttctgtggaactagatgaacttcaaactccttgggaaacctcagaccatgctgaa
acttctgacatgttcaacgagactgatcccatcttgggagcgccaactttggaacccagc
tttcttgatgctcctcaaccagaagatggacgggagggtgatgaaacgctgaccgactgt
ttgagcatgcctagttcggactctcaaagcaaccctgtcgaaccactggcaccgagcttc
atgttgttcaaagaccttaatgttggagagacttctgtggatccgacagatctgtcagcc
agtcttccagaatatgttccgccaacacctcttggactcccggatgtgagtcttgaccag
acggatcccattagtgaggagcaggaggacaagcttagtgattccaacatcacatttggt
gttcccagtccagaagaaggagctgaaagcgtagggtttaattttgagaaagaagacctt
tcccctgacagtccaaagacaaaggatactcaagatgagatcgacaacatgcctttaata
gagtctacaagggtctctgattccaatggagatttgaaagatccttgtgaagctgttttg
gaagaaccttatgaaaagcctctaacagagccagaaaaagtgcctttagaggagtcttat
gatttaacttgtgacgagaccctgcaggaaccttgtgaagggtttcagcaagacacagtg
gaacagcagttggtggaagaaacctgcaaagaaccaccagagccaatagaagagtgcaat
ctaactaacactactctttcaacagattaccctatgccaccttcactcccatcatctcca
actaccttacctgacacctctgtatccccgggccttgacgcagtcccaaaacaagagttt
cttgtggatccagtagtgtcagatgtgaagcctgagccagatagcactacacagacccct
caccttgagcagactgaggctttggaagtaaaggacaagataaaagatgaaggtgcaaag
gcaccagcattattgggagatgttgatggaccacactttgcattgcccatgtgtgagatg
gcagacagtgtccatgaaataagggaaccaaccattgctcagcttctacaagagaaagca
ctcttctcgttctcagagtggcctaaggacagagtgatcatcaatcgtattgatagtatc
tgccacactatcttaaaggggaagtggccttcctccagtcaacagtatgagtctcccacc
tctttggctaacacctgcgtgcccagcagtgcccaccagagggcaggatttctgcctacc
agaatgcctatatctcagagccttaactttaacctctcacacacagtaccccacttacca
aaggagcggctagtggccccagcttttctccctgagctcaaacgtccgagacgtgggttt
gaattcgaggcagaagtccttgccaaaccaagccagcttggagaaaagatccaggttggc
gtgcctcatcgtgctaacgctctcctccttaatggttggcaggatgctgctattgacctc
tccaaaccaacagagctaacagttggtggagacagtgggtcaattggtcagatgagccac
actgtccagtcagcaccccataaaataactgggataggctccatacaaggctcgctggga
ttggatatggctggcattttgcaggctggcctgattcaccctgtcacagggcaaattgtc
aatggcagtcttcgccgtgatgactcaatgttgagacggaggagaggacggagaagaaat
gtagagactcctgatctcagctttataaagggacaaaacatgaacttacctgaacaacag
agtgggtcagagagtatcagccaccctgttgtgtcctccacatcctcccagtcagagggc
cctccagccaccccgactacacttcctactccgcctgcagcaccctctccagctcctcct
ccggcctcagagaccctgaatgtgagcatggacagggaaatggccaataaaggcctaatg
gaatggctccgacaaaaccccaactacaacatggagctttctgctttcccgaatgcaaac
ttattgcacagtttcctggagcgtccaaaacagagaaggcatcgctgcaaagacccatcc
aagctggacatcaactctctaaccggggaggagagagtcccggtagtgcacagaaacaca
ggccgcagacttggaggcgctatggctccagcgattaaagagctctcccgttggctcgac
gcaaactcagattactctgtagctcctgattgggctgatgtggtgaagcactcgggtttt
ctaccggagggcaaattcacacgcatcctctctggccctgtgtgtcgggatcccggtcca
cgtagaagaggcaggcgaccccgcagtgagatgcccaaagcccccgagctaaccgctggc
atgggtccgctcttcatgaacggtgggctcattggcagcatggatcaggttagcttaccc
aatctccgcaatgtccctggaatcccgctaaccggaatcatgggctttcctcatggtttc
gccactgccgtactgtcaggagaagatgccaagaatggactcagcatgctgcccatgatg
ctccacggtatggccgtgcagccgcccatgtacagcgcacacatgagtgggatgataaat
caacagctgtccacaacgacgtccactgcaagcgcatcctccacttcagcgagtgtgact
tcgacaaactctgcaaccgtaacctcaacctccagcccggcggatagttcggaatctacg
cctcaatgtgaaaacgcaagctctccgatgagcacggagaatgggaataaggaggatgca
aagcaaggaggggaagagaagaaagtgtccgcttcggtgtctacagctgcagccactagc
agcagcagcagtagtagtagcatcacaagcaccggcagccatttgacctttaaccctttt
ctaatcccgggaatgtcacatagtctgttgtatccacacatgttcttgccaccgggcagt
ataatggctctgcccgctatgcctgcagcagacagcacgggcagtcccaagaggaagagg
aagaaggttagggaagaaggagcagaggagggaagtggcaatgttgttgtggaatcgaag
ggggttaaagacgaacagacactcgaacaaaagagccaagagggcggaatggaagatggc
agacctgatgtagatttagctccagtcaaagatccttctgaccctataaaagctccttct
gaggataaaagtactgaggaaaaggacaaaaatgagctgggagaggaaaccgagtcaaat
gctcaaggctcttgtgacggtggagactag
DBGET
integrated database retrieval system
