Carassius gibelio (silver crucian carp): 127961482
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Entry
127961482 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127961482
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127961482
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127961482
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127961482
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127961482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
TFIIA
Motif
Other DBs
NCBI-GeneID:
127961482
NCBI-ProteinID:
XP_052416580
LinkDB
All DBs
Position
B7:33575726..33610989
Genome browser
AA seq
1377 aa
AA seq
DB search
MMVPSEEQQLVPKEGIFWSCRQSIFEEMQKRFSQIESAAEEPRVLCIVQDTTNAKTVNER
LTLNLPASTTVSKLYEDVAHKAGYVNGTFCLGWANTGDMAPLDQASEMSLVLSGFEAGKR
NFLQLTDKDGEQPQIASDESGAADSSGLDDSSRDRFIGPLPRDGTVGCSSDYSSPSYSYS
SILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEDSEEDPVNSIPYQLQ
RLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLI
NQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLD
GPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDM
SPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSSAERALK
PKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGSS
GSRGYYSSAFASSTNAYMLMYRLKDPSRNAKFLEVEDFPEHIKRLVQREKESEEQEKRQR
EIERNTCKIKLFCMHPVKMMMMENKLEVHKDKTLREATEMAYKLMDLDGVVPLDCCRLVK
YDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLEIRRPDQVFQPYKPGEVMVKVHV
VDLKSESIAAPVSVRAYLNQTIIEFKQLIAQATGLCAETMRIVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSDSTDHQAVFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSLANRT
SCPKASADSEDSFDGAKGSRKSVEAILEESTEKLKNLSLQQQQQQQQQQQQSSSTSDSQK
SSEHSDFEFIESPSQEPDAASQPSQTENCTRTASDTENQFPSEERSDSDVNNDRSTSSVD
SDILSSSHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSE
YDENGKSKAEAQYLYFKTEPYSQEDGSGEGQKCLLVHVDKRITLAAFKQNLEPFVGVPST
QFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPC
KFLLDTVFAKGMTVRQSKEELLPQLKDQCKLDLSVDRFRLRKKTWKNPGTVFLDYHVYEE
DINISSNWEVFLEVLEEPERMKSMSQLAVLSRRWCPAQMKLEAFHEVVLESSSVEELKEK
LSELSGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYR
DSTEELMELSEEQRNELMKKESSRLLKTGHRISYSPRKEKALKIYLDGGPTKDPGQD
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcccagcgaagaacagcagcttgtgcccaaagagggtattttttggagttgc
aggcagagtatttttgaggagatgcagaagaggttctcacagattgaaagtgcagcggag
gagcctagagtgctgtgtatagtgcaggacaccaccaatgccaagaccgtcaatgagagg
ctgacgctcaacctgcccgcctccaccaccgtcagcaaactctacgaggatgtggctcac
aaggctggatatgtgaacggcactttctgcttggggtgggccaacactggcgacatggct
cctctggaccaggccagtgagatgtccctggtgttgtccggttttgaggcggggaaaaga
aattttctgcagcttacggacaaggatggggaacagcctcagatcgcttcagatgaatct
ggcgctgcagacagcagtggtcttgatgacagctctcgggatcgcttcatcggaccctta
ccgcgggacgggactgtcggctgcagtagtgactacagcagccccagttactcgtactcc
tccatacttaacaaatcagacacaggttatgtaggtttggtcaaccaagcaatgacttgt
tacctgaacagcctcctgcagaccctgttcatgacccctgagttcaggaatgcactctac
aattgggagtttgaggactctgaggaggatccggtcaacagtatcccataccagctccag
aggctgtttgtgcttctgcagaccagtaagaagcgcgccatcgagactacagacgtgacc
cgcagctttggctgggacagcagtgaggcctggcagcagcatgacgtccaggagctttgt
agagtcatgtttgatgcactggagcagaagtggaaacagacagagcaggctgacctgatc
aaccagctttaccagggcaaactgaaggactatgtgcgctgtttggagtgtggctatgag
agctggaggattgacacgtacttggacatccctctggtcatcaggcccttcggggccagc
caggcttttggcagcgtggaagaagccctgcaagctttcatccagcctgagactctcgat
ggtcccaaccaatacttctgtgagcgctgcaaaaagaaatgtgacgcccgcaagggtctg
agattcctccatttcccgtacctgctgactctgcagctgaaacgcttcgactttgattac
accactatgcaccgcattaaactcaatgaccgcatgaccttcccagaggagctggacatg
agccccttcatcgacgttgaggatgagaaatcacctcagacagagagctgtactgacagt
ggggcggagaatgaaggaagctgccacagtgaccagatgagcaatgatttctctacggat
gatgctgttgacgagggcatctgtctggataacaccagcagcgcagagcgggcgctcaaa
ccaaagagctcattgacctttgaactcttctcggtcatggtgcattctgggagtgctgca
ggtgggcactactacgcctgcattaagtccttcagtgacagccagtggtacagcttcaat
gaccagcacgtcagcaagatcacgcaggatgacattcggaagacatatggtggatcctca
gggagcagaggctattactccagtgcctttgccagctctacaaatgcatacatgctcatg
tacagactaaaagacccctcccggaatgcaaaattcctggaagtggaggacttcccagag
cacataaagagactagtgcagcgagagaaagagtctgaagaacaggagaagaggcaaaga
gagatcgagcgcaacacatgcaagatcaagctcttctgcatgcatccagtgaagatgatg
atgatggagaataagctggaggttcacaaggacaaaactctcagagaagcaacagaaatg
gcatacaagctgatggatcttgatggagtggtgccactggactgctgccgattggtgaaa
tacgatgagtttcacgaatatctagaacgttcatatgaaggagaggaagacatgcctatg
ggtctgctgctcggcggggtcaagtcttcgtacatgtttgacctgctcctcgagatccgc
aggcctgaccaagtgttccagccctacaaacctggagaggtgatggtgaaggtccacgtg
gtggatctgaagagtgagtctattgctgctccagtcagtgtcagggcatatctcaaccag
actattatagagttcaagcaactcattgcacaggccactgggctttgtgcggagacgatg
cgtatcgtcttagagcgctgctacaatgacctacggctgctttatgtgcccaacaagact
ctgaaagcagaaggtttcttcaggagtaacaaggttttcgtggagagctcagactcaacg
gaccatcaggccgttttcactgactctgttttgtggaagctcctggatcggcacgggaac
acaatcagactgtttgtctctttgcccgagcagtcgccaggctctttggccaacagaact
agttgccccaaagctagcgctgactctgaggactcttttgatggggcgaagggcagcagg
aagtcagtggaagccattcttgaagagagcacagagaagctaaagaatctttctttacaa
caacagcagcagcagcagcagcagcagcagcaatcctccagcaccagtgacagtcagaaa
agctcagaacacagcgactttgagtttatcgagtcgccatcacaggagccggatgctgcc
tcgcagccttcccagacagagaactgcacacggaccgcctcagacactgagaaccagttc
ccctctgaggagcgctccgactcggacgtcaataacgaccgcagcaccagctcggtggac
agtgacatcctgagctccagccacagcagcgacacgctgtgtaacgccgacagcggcccg
ctcccgctggctaacggcctcgactcgcacagcatcaccagcagccggcgctccaaagca
cacgaggggaagaaggagacgtgggacacggccgaggaggactctggtacggacagcgag
tacgacgagaacggcaagagcaaagctgaggcccagtacctgtacttcaaaacagagcca
tactctcaggaggacggatctggagaaggacagaaatgtttacttgtccatgttgacaag
aggatcacattggcagcattcaaacagaatctagagccgtttgttggcgtcccctccact
cagtttaaagtcttccgggtttatgccaacaaccaggagtttgagagtgtgcggctcaat
gagacgctctcctctttctctgatgacaacaagatcacgattcgattgggacgtgcactg
aagaaaggagaatacagggtgaaggtgtaccagctgctagtcaatgacccagagccctgt
aagtttcttttggacactgtgtttgctaaaggcatgactgttcgacagtctaaggaggag
ttgctgcctcaactcaaagaccagtgcaaactggacctcagtgtagataggtttagactc
aggaagaagacctggaagaacccaggcacagtgtttcttgattatcatgtctatgaggag
gacatcaacatctccagtaactgggaggtgttcctcgaagtccttgaagaaccggagcgg
atgaagtctatgtcccagttagcggttctgagccgtcgctggtgtccagcccagatgaag
ctggaggccttccatgaggtggtgctggagagcagcagtgtagaggaactcaaggagaaa
ctcagtgaattgagtggaattcctcttgagaacttggagtttgccaagggacggggaact
tttccttgtgacatttcggtgttggagatccatcaggatttagactggaatcctaaagtc
tccaccctcaatgtctggccactctacatctgtgatgatggcgctgtgatcttctacagg
gacagcactgaggagctcatggagctgtctgaggagcagcgcaatgaactgatgaagaag
gagagcagccgcctgctgaagacgggccaccggatcagctactccccacgcaaagagaag
gccctcaaaatttacttagacggagggcccaccaaagaccctggacaggactga
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