Carassius gibelio (silver crucian carp): 127962010
Help
Entry
127962010 CDS
T08819
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127962010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
127962010
NCBI-ProteinID:
XP_052417365
LinkDB
All DBs
Position
B7:35701265..35734023
Genome browser
AA seq
2162 aa
AA seq
DB search
MTAKHRIYLSFLLVGLFQQIQGSLVKTNLGLKVKRGQSVFLQEEDLQFHIRRAKDACKLE
VVLNEPITQRVGTLTPQVFNCHFLADEVKYTHNGCPILKEDTVKLRLYRFTETETYSELF
SLHVEIMEPDCNVIKFGSQNLEVPEFDGLSNVLDGNVVSFHYEHRHNIECTVRVTTLETH
LPVHGQLVTGEPEEPDGPRGDEPDSFVSLRRQLDNKARAHCKSDECLKGLKLLKITKVPC
NDFLTMGIRYHHIDPPSPDIDYIAIRLDLTDTRSRSIIQSEQVWIPVTIKDAMPNQPPKP
AFMSMFILEVDQFILTPISTATLDAEDDETPKQRLVFNITKAPSEGFITHLSDHTKPITS
FTWTDLNDMMVSYQPPNSSHTQRRNYEVEFEVHDFYFEKSQPVIVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQFQIVDNDNLKAVKIITVDGLQHGRLTVKGGKGFMFTVKDIK
DGVVRYHHDDSDTTKDYIVFRITDGLHQTRHKFPINILPKDDSPPFLITNMVLELSEGQT
ALLRGSILQACDLDSSDDYIMFNITRSPEAGEIMKMPGPGITGYPVTRFLQKDLFHSIIY
YQHSGGEVFDDSFEVVLSDFHDPPNLSEPQVVVIEIQPVPDQPPQEAPGVTRHLVLNETD
VIYLTKQQLHFVDLESPDSELTYTVTTPPFYSTTYSGSDAGRLFLVDSIPKFTKDPNAPM
LRLFTQHAVNFMKVAYMPPILDIGPFPQHIQFVLSVTNQQGSTTAGICFNMTVLPEDNLA
PEVRVKPLMVDEGGESWVSEDHMRLSDQDSLQDSLHVELKTGPQHGSIYLDGTAMSPGQT
FTVRDLKSLKVRYRHDSSETEHDNIKFIATDGINTADFVLHVKVTLVNDEVPVLVPGLKP
ILVCAEGQEVLITIEYICATDPDSEDSTLMYMIARQPYHGVVQRNGIIVDRFIQADVTAG
FISYRHTGQEIGLQPRHDVVTFVISDGESGPVPSCCSNRAPVFNAQPPEVQNALPVYDLN
ITVYPVNNQPPAIAVGEVFMVDEGGSASITVTHLRVEDQDSAPEDLNLILVTPPQFGYIE
NVLPSPGFEKSNMGISITSFTYRDVLNGHINYVQSRHQRMEPTSDQLMLHVSDGKQQSSS
VPFYIIIHPTNDEIPEFLARNFTVREGDMKELDSSVISAVDLDVPRERLMFSIVQQPQHG
SIMSVPHGNDVTLHKRGSETPVEHFTIDDLRNGMTLMYVHDDSESEQDGFIVQLSDGKHQ
LQKDVRVKVLPVNDEEPQIIRNSGIEMGAGESRLISSAVLSAHDKDTPSSDIIYVFESVP
NHGVIQMKVGTDWVSVSAGMNCSQQVLEMNLLRYLHTGHPGAGAADFFVFHVFDGKNRSP
AQHFHITVKELEKGEIALLVKPVRTSRGERVILTTDVLLAVDGTDKPEELLYVISVPPAH
GHVEYIKHSGVQIQSFSQLDVAANLVCYVHDNRATSPKETLRFVVSNGISTRNGTLEIVV
EMTDKVLPTLERNTGLRVPQGSSMSLSPDALFLSDPDSPHTALSFSVLQPPQYGLLLLKG
RPLLAGSNFTQQNIQDLDVTYKHTGGASQIDRFRFTASDSTERGFLLDGKVHTEPIFFTL
QIEALDCAAPQIAVLETLWKVELLKDGRYGIFISSRELKAQDLNSADADLIYHILRVPYF
GYLENYTSGEFVRQRFSQKDLNRRNIVYIINSALDALTDSLEFTVSDALGNTGASHKLEF
SWASVQLTRTEYVICESQGSISLTIQRKGNVQDSSYVTVQVKELTASAGKDFIPASSLIQ
FDPGVVSRVWKVEIVQDSLEEADEKFEVNLVSPVGAVLKDNSQATIFIKDTNGQCRESRF
RADTGLQGREVDSGPYPPHGSIQVETLPFSQSYIRGDGDIIAQAPTATKKRLRVTGNGKV
VQPSEIVRHGSDIIYKYHGIVSMAVEEDRADSGSDGKTQVTSWGQQRPPHARTVPHTNTR
AAAQPVVTQPSSKPCTPELTGFLHYNDSSAQLLCCNGDSWRPWTPNNETVKAQKCPPGWT
YHNDYCYILSAERKATWSAAARACRESYDGHLVSVLSKGVMGWLWDFSDRKPFWIGLNDR
DSKGRWEWVGGEPVTYTNWRQTPPKNRKKGTRRCVLVWRKTKWQIRDCKKGKGHRYVCHI
KM
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaacacaggatatatttgtctttcctcctggtgggtctcttccagcagatt
cagggctctctggtaaaaactaatcttggtctaaaggtgaagcgaggccagtcggtcttc
ctgcaggaggaggatctgcagtttcacatccgcagagccaaggacgcctgcaagctggaa
gttgtgctgaatgagcccattacacagcgggtgggcacactaacccctcaggttttcaac
tgtcacttcttggctgatgaagtgaaatacactcataatggatgtccgattttaaaagaa
gatactgttaaacttcgtctctacagatttacagagacagagacgtacagtgagctgttc
tctctccatgttgaaatcatggagccggactgtaatgtgattaagtttggatcacagaat
ctcgaggtgccagagtttgatggcctctccaatgttctggacggcaatgttgtgtccttc
cactatgaacacagacataatattgagtgcacagttcgggtgacaactctggagacgcat
ctacctgttcacggtcagctagtcactggggaaccggaggaaccagacgggccgagagga
gatgaacctgatagctttgtttctctacgaagacagctggataataaagccagagctcat
tgtaagagtgacgagtgtctaaaaggtcttaaactgctgaagatcaccaaagtaccatgc
aatgatttcctaacgatgggcatccgttaccaccacattgaccctccgtctccagacata
gactacatcgccattagactggacctcacagacacccgcagcaggagcatcatccagtcg
gagcaggtctggatcccagttaccattaaggatgcaatgcccaatcagccgcccaagcct
gctttcatgtccatgttcatcttagaggtggatcagttcatcctgactcctatctcaacg
gcaacgctggacgcagaggatgatgagacgcccaaacagcggctggtgttcaacatcact
aaagcccctagcgagggcttcatcactcacctgtctgaccacaccaaacccatcacctcc
ttcacatggacggatctcaacgacatgatggtcagctaccagcctccgaactccagccac
acacagcgcaggaactatgaggtggagtttgaagtgcatgatttctactttgagaaaagc
cagcctgtgattgttcacgtgtcaatcaggacagctgataccaatgcgccacgagtatca
tggaacatgggcctcagtctgctggaaggtcagtctcgtccaatcacatgggatcagttt
cagattgtggataatgacaacctgaaggcagtgaagattatcactgtggacggcctgcag
cacgggagactaacggttaaaggtggaaaaggtttcatgttcactgtgaaggatataaag
gacggtgtggttcgctaccaccacgatgacagcgacacgactaaagattacatcgtcttc
cgcattactgatggcttgcatcaaaccagacacaagtttcccatcaacatcctgcccaaa
gatgacagcccgcccttcctcattaccaatatggtgctggagctgtctgagggccagacg
gctcttctgagaggatctatcttgcaagcctgtgatttggactctagtgatgactacatc
atgttcaacatcaccagatctccagaagcaggcgagatcatgaagatgcctggtcctggc
atcacaggatatccagtgacccgttttcttcagaaggacctgttccactccatcatctac
tatcaacactcaggcggtgaggtgtttgatgactcttttgaggtggtgctctctgacttt
catgaccctcccaatctctcagagcctcaggtggttgtgattgagatccagccagtccct
gatcagcctccacaggaagccccgggtgtgaccaggcacttggtgcttaatgagacagat
gtcatctacttgaccaagcagcagctgcactttgtggatctggagtctccagatagtgag
ctcacgtacaccgtcaccaccccacctttctacagcaccacctatagtggctctgatgca
ggaaggttgtttctggttgatagcatcccaaaatttaccaaggacccaaatgctccaatg
ctgagacttttcactcagcatgcggtcaacttcatgaaggttgcttacatgccccccatc
ctggacattggaccgttccctcagcacatccagtttgtcctgtcagtgaccaatcagcaa
ggcagcacgaccgctggaatctgcttcaacatgacggttctgccggaggataacctggca
ccagaggtgcgtgtgaagccactgatggtggatgaaggtggagagagctgggtgagtgaa
gaccacatgcgtctgtcagaccaggactctctacaggactctctgcacgtggagctgaag
accggaccccagcatggcagcatttacctggacggcacagccatgagtccaggccagact
ttcacagtcagggatctgaaaagcctaaaagttagatatcgccacgacagttctgagaca
gaacatgataatattaagttcattgccacggatgggataaatactgctgactttgtacta
catgtcaaggtgacactagtcaacgatgaggtgccagtcctcgtgccaggattgaagccc
attttagtctgtgccgagggacaggaagtgctgatcaccatagagtacatctgtgccact
gatcctgacagtgaagacagcacactgatgtatatgatcgcccgacaaccatatcacggg
gtggttcaaagaaacggcatcatcgtggaccgcttcattcaagcggatgtaacggcaggc
ttcatttcctacagacacacaggacaagagattgggctgcagccacgtcatgacgtcgtt
acgtttgtgatctctgatggagaatcagggccagttccttcctgttgcagtaacagagcc
cctgtattcaacgcacaaccacctgaagtacagaacgccctgcctgtctacgaccttaat
atcaccgtttatcccgtgaacaaccaaccaccagctatagctgtcggagaggtgtttatg
gtggatgagggagggtcagcctccatcacggtcacccatctgagagttgaagaccaggac
tctgctccagaggaccttaacctcattctggtcactccgccacagtttggatacatagaa
aacgtcctgcccagtccaggatttgagaagagcaacatgggcatcagtatcacctctttc
acttacagggacgtgttgaatggacacattaactatgtccagtctagacaccagaggatg
gagcccaccagcgaccagctcatgctgcatgtgtccgacgggaaacagcagtcctcttca
gtcccgttttacatcatcatccatccaaccaatgacgagattccagaattcctggccaga
aacttcacggttcgggagggagacatgaaagagctggactcatctgtaatcagtgcggtg
gaccttgacgttcccagagagcgtttaatgtttagcatcgtccagcagcctcagcacggc
tccatcatgagcgtgccacacggcaatgatgtcacacttcacaagcgtggatctgagacc
cctgtggagcacttcaccatagacgacctcaggaatggcatgactctgatgtacgtgcac
gatgactctgagagtgagcaggatggatttattgttcagctctccgatgggaaacaccag
ctccagaaagacgtgcgagtcaaagtactgcctgtcaatgatgaggaaccgcagattata
cggaacagtgggattgagatgggggctggggagtccaggctgatctccagtgctgtgctc
agcgctcacgacaaagacactccgtcctcggacatcatctatgtgttcgagagcgtcccg
aatcatggtgtcattcagatgaaggtgggcacagactgggtgtctgtatcagcagggatg
aactgctctcagcaggttttggagatgaacctgttgcgttaccttcacaccggtcatccc
ggagccggcgctgctgacttctttgtcttccatgtgttcgacggcaagaaccgctctcct
gcgcagcacttccacatcacggtcaaagagctggagaaaggagaaatagcattgttggtg
aagcccgtgaggacgagtcgtggggagcgtgtgatcctcaccacagatgtcttgctggct
gtagacggcactgacaagccggaggagcttctgtacgtcatcagcgtacctccagcacat
ggacacgtggagtacatcaaacacagcggagtgcagatccagtcgttcagtcagctggac
gtagcagcaaacctggtgtgttacgtacatgacaacagagccacttcacctaaagagacc
ctgcggtttgtggtcagcaatggcatatcaacccgcaacgggaccctggagatcgtagtg
gagatgactgataaggttctgcccacactagagcgtaacaccggtctgcgggttcctcag
ggctccagcatgagtttgagccctgatgccttgttcctgtctgaccctgacagcccacac
actgccttgagcttcagcgtgctgcagcctcctcagtacggtctgctgctcctgaaggga
cggccgctgctcgctggcagtaacttcacccagcagaatattcaggatctggatgttaca
tacaaacacactggaggagcttctcagatcgatcgcttcagattcacagcctccgatagc
accgagagaggcttcctgctggatggaaaagtgcatacagagcccatcttcttcacactg
caaattgaagctctagactgcgccgctccgcagatagcagtgctggaaacactgtggaaa
gtggagctcctcaaagatggtcgttatgggatcttcatttcctccagagagctcaaggct
caggatctgaactcagcggatgccgatctgatctatcacatcctcagagtgccgtacttt
gggtatctggaaaattatacaagtggtgagtttgtgaggcagcgtttctctcagaaggat
ctgaacagaaggaatattgtctacatcataaactctgctctggatgctttaactgacagt
ctggagttcactgtttctgatgcgctgggaaacaccggagcctctcacaaactggagttc
agctgggccagtgtgcagctgaccaggactgagtatgtaatatgtgagagtcaagggtca
atctcactgaccatccagaggaagggaaatgtgcaagactcgtcttatgtgactgtacag
gtgaaagaactaacagcatctgctggaaaagactttataccggcttcatctctgattcag
tttgacccaggggttgtcagtcgagtatggaaagtagagattgttcaggattctctagag
gaagctgatgagaaatttgaggttaatttggtctctcctgtgggtgcagtgctgaaagac
aactcacaagccaccatcttcataaaggacacaaatgggcagtgcagagagagccggttt
agagcggacactggtcttcagggccgagaggtggattcgggaccataccctccacacggc
tccatccaggtggagactctacccttctctcagagctacatcagaggagacggggatata
atagctcaagctcccactgctacaaagaaaagactccgagtcactgggaacgggaaagtg
gttcagccctctgaaatcgttcgtcacggatctgacatcatttacaaatatcacggtatt
gtatcgatggcggtcgaggaggaccgcgcagactcggggtctgacggaaagacacaggtg
accagctgggggcagcagcgccctcctcacgccaggaccgtcccgcacacgaacaccaga
gctgctgcacagcctgttgtgactcagccgtcctccaaaccctgcaccccagagctcact
ggctttctgcattataacgacagctcggctcagctgctctgctgtaacggggactcctgg
aggccctggaccccgaataacgagactgtgaaagcacagaagtgtcctccaggatggacg
tatcacaacgactactgttacatactgagcgccgagcgcaaagccacgtggagcgctgcg
gcgcgggcctgcagagagagctacgatggacacctggtcagtgttttgtcgaaaggagtc
atgggctggctgtgggacttcagtgacagaaaacccttttggatcggactgaatgatcgt
gacagcaaaggccgctgggaatgggtgggtggagagcctgtcacttacaccaactggagg
cagacccctcctaaaaacaggaagaagggaacgaggaggtgcgtcctggtctggaggaag
accaagtggcagatacgagactgtaagaaaggaaagggccaccgctacgtgtgtcacatt
aaaatgtga
DBGET
integrated database retrieval system
