Carassius gibelio (silver crucian carp): 127962430
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Entry
127962430 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like protein isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127962430
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127962430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
DUF4407
zf-RING_5
U-box
DUF2383
Motif
Other DBs
NCBI-GeneID:
127962430
NCBI-ProteinID:
XP_052417947
LinkDB
All DBs
Position
B7:32591829..32602527
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AA seq
545 aa
AA seq
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MAAAISQDQFSCPICLDLLKNPVTLCCGHSFCMSCITGCWDQEEQKGVYSCPQCRQTFSP
RPALGKNVVLAEMLEKLIKPKLQTVVPAQHYAEPGDVECDVCTERKSKAVKSCLVCLESY
CQTHFEHHEEFRSGSGKRHKITDAIGQLQEMICHEHNKLLEVYCRTDQQCLCVLCMMKEH
KTHDAVTVAEQKTVQEKHLKERLKQQIQETEKEIQELREAVKCHKSSAEAAVKDSERIFT
ELITSIERSRSEVIQLIKDQEKAAVSRAEEFLKRLEQKTADLRKKEAELEQLSHTEDICF
LQSLHSLSVLPDSPDIKISALLSYDNVEKSVSLLRKKLEDFCQEKIEAMSCRVNCIQIIS
FPEPKTREEFLQYRSKFTLDPNTVNKNLHLSDGNRMATCVNIVQKYPDHPDRFDYWEQVL
CREKVCGRCYWEVELKRGVGISVAYKSISRKGTGNASLFGSNGQSWKLSCNPWSCSFRHN
NRKIKLPLEPSSCIGVYVDHSAGILSFYRVSDKMTLIHREQTTFAQPLYPGFRVIEESSV
KLCDL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctatttctcaggaccagttcagctgtccaatctgcctggatctactgaag
aatccagtgaccctttgctgtggacacagtttctgtatgagctgcattacaggctgctgg
gatcaagaagaacagaaaggggtttacagctgcccccagtgcagacagaccttcagtcct
agacctgcgttaggcaagaatgtggtgcttgctgaaatgttggagaaactgataaagccc
aaactccaaactgtggttcctgctcagcattatgctgaacctggagatgtagagtgtgac
gtctgtactgaaagaaaaagcaaagctgtcaagtcctgtcttgtgtgtttggaatcttac
tgtcagactcattttgaacatcatgaagaatttcgttcaggttcaggaaagcgacacaaa
ataactgatgccataggacaactccaggagatgatttgtcatgagcataataagcttttg
gaggtttattgtcgtacggatcaacagtgcctttgtgtgctctgtatgatgaaagaacat
aaaacccatgatgctgttacagttgcagaacagaagacagtgcaagagaaacacttaaag
gagagactgaagcagcaaatccaggagacagagaaagagattcaggagctgagagaggct
gtgaagtgtcataagagctctgctgaggcagcagtgaaggacagtgagaggatttttaca
gagctaatcacctccattgagagaagtcggtctgaggtgattcagctgataaaagatcaa
gaaaaggctgcagtgagtcgagctgaagaattcttgaagcgtctagagcagaagactgct
gatctgaggaagaaagaagctgagctagaacagctttcacatactgaggacatctgcttc
ctccagagtctccattctctctctgtcttgcctgactcacccgacatcaaaattagtgct
cttctgtcctatgataatgtagaaaaatctgtctctcttctgagaaagaaacttgaggat
ttctgccaagagaagatagaagcaatgtcttgtagagtgaattgcatccagataatttcc
tttcctgaacccaagaccagagaagagttcctccaatatcgcagcaagtttactctggat
ccaaacacagtgaataaaaaccttcatctctctgacgggaacagaatggctacttgcgtg
aatatagtccagaagtatcctgatcatccagacagatttgattattgggagcaggtgttg
tgtagagagaaagtgtgtggacgctgttattgggaggttgagttgaagaggggtgtgggt
atatcagttgcatataaaagcatcagcaggaaaggcacaggtaacgcatctttgtttgga
agtaatggtcagtcctggaaactctcctgtaatccctggagctgttcgttcaggcacaat
aacagaaagataaaactgcctctagagcccagctcctgtataggagtgtatgtggatcac
agtgcaggaattctgtctttttatagagtctctgacaaaatgaccctcatccacagagaa
cagaccacattcgctcagcctctctatcctgggttcagggttattgaggaatcatcagtg
aaactctgtgatctgtaa
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