Carassius gibelio (silver crucian carp): 127964626
Help
Entry
127964626 CDS
T08819
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127964626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127964626
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
U1 related factors
127964626
Complex B
127964626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
PTPlike_phytase
WW_1
Motif
Other DBs
NCBI-GeneID:
127964626
NCBI-ProteinID:
XP_052420847
LinkDB
All DBs
Position
B9:complement(3592880..3613158)
Genome browser
AA seq
878 aa
AA seq
DB search
MSWTDANSGPSQAPPFPGVTLPPSGIPLPFMGPPGIPPHFPPMGMPPMGQRPPSMAPMPP
GILPPMIPPMGAPPMAQMPAMLPPMIPGMMMPPRLPAASIQPTGPPGVSPVESAAPAAPG
TASTTSTESDEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCLW
KEYKSDNGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTADVVAPGTTPALTSQSES
SVTVAAVAETEATMATVATEEQPSHVPAPVADVSSDVTVNSTEDTPSVETQPSNDVSKEE
RPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFGDQDVWSCV
PERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGLLVEINTGFEEFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKSMLKQATPPLEPEATWEGTRERFLKEPAFEDITLESERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEEDEYQSKKKKRSASKSPSEHSSSG
ESERSYKKSKKHKKKGKKRRHKSGSPESEGEKERKGREKEKDKENDKSRGKTRGESKQKS
PKRKSTKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggactgatgctaatagtggccccagtcaagcaccacctttccctggtgtaacg
ttaccaccttcaggaatccccctgccctttatggggccaccaggaatcccgcctcacttc
cctccaatgggaatgccaccaatgggccagaggccgcccagcatggcccccatgcccccg
ggaatactgccccccatgatccccccgatgggagctccacccatggcacagatgccagcc
atgctaccaccaatgataccaggaatgatgatgcccccccgactgccagctgcatcaatc
cagcctacgggaccgcctggtgtgagtccagtggagtctgcagcaccggctgctcctgga
acagctagcaccacatcaactgaatctgatgaacagccaaaaaagaagtcagtatggact
gagcacaaatcactggatggaaaaacatattactacaacacagagaccaaacaatccacc
tgggagaaaccagatgaactcaaatcacctgcagagcaaatgttgtccaaatgtctgtgg
aaagagtataagtcggacaacggcaagccctactactacaactcccagaccaaagagtct
cgctggactaaacccaaggagctggaggacctggaggcgatgataaaggcagaagaaaac
gggacggctgatgttgtggctcctggcaccacccctgctctcacatctcagagcgagtcg
tctgttaccgtggcagcagttgctgagacagaggctaccatggcaacagtcgccacagag
gaacagccgtctcatgtgcctgctccggttgctgatgtcagcagtgatgtcacagttaac
tccactgaggacacgcccagcgtagagacgcagcccagtaatgatgtttctaaggaggag
agacctgagctggtaaagaaagtttacaagtggaacacaaaagaggaggcaaagcaggca
tttaaagaactgctgaaggaaaagggcgtttcctccaatgcatcatgggagcaggcaatg
aagctgataattaacgaccctcgttacagtgctctgcccaagctgagtgaaaagaaacag
gcgttcaatgcttataaagtccagacagagaaagaggaaaaggaggaagccagaatcaaa
tacaaggagtctaaagagactttccagcgcttcctggagaaccacgagaagatgacctcc
accacacgatacaagaaagcggagcagatgtttggcgatcaggacgtgtggtcctgtgtc
cccgagagagaccggctggagatctacgaagatgtgctcttttatttagcaaagaaagag
aaggaacaagccaagcagctgaggaagaggaactgggaagctctgaagaacattttggac
aatatggccaatgtgacgtacagaacgacgtggtctgaggcccagcagtaccttctggat
aaccccacctttgctgaagacgaggagctgcagaacatggacaaggaagatgctctgatc
tgtttcgaggaacacatccgtgctcttgagaaagaggaggaggaagagaaacagaagact
ctgctgcgagagagacgcagacagcgcaagaaccgagagtctttccagaaattcctggat
gagcttcacgatcacgggcagctgcactccatgtctgcctggatggagatgtacccaacc
gtcagcgctgatatccgcttcaacaacatgctgggccagccaggctccacccctctggac
ttattcaagttttacgtggaggatctgaaagctcgttatcatgatgagaagagaatcatt
aaagacatcctgaaggataagggcttgctggtggagatcaacacgggctttgaggagttt
ggctcagtgatcagctcagataaacgcgccaccacgctggatgcaggaaacatcaaactg
gccttcaatagtttgctggagaaagctgaagcacgcgagagggagagagagaaggaggag
gccaggaagatgaagaggaaggaggcggcgtttaagagcatgctgaaacaggccacgccc
cctctagagcccgaggccacatgggaggggacacgagagcgcttcctgaaagagcctgcg
tttgaggacatcacgctggagtccgagaggaagaggatattcaaagacttcatgcatgtg
ttagagcacgagtgtcaacatcatcattcaaagactaaaaaacactcgaagaaatccaag
aaacaccacagaaaacgttcccgatctcgatcaggctcggagtcagaggaggatgagtat
caatcgaagaagaagaaacgctctgcttccaaatctccatccgagcactcgtcctctggg
gaatctgagaggagttacaagaaatcgaagaaacacaagaagaagggaaagaaaagacga
cacaaatcgggctcccctgagtctgaaggagagaaagagcggaaaggaagagagaaagag
aaggataaagagaatgacaaatccagagggaagacacgtggagaatccaaacagaaatcg
cccaaaagaaagagtacaaaagaagagggtggatgggatacgtccgggagcgagctgagt
gaaggagagctggagaagaggaggcgcacgctcctggagcagctggacgcaccgtaa
DBGET
integrated database retrieval system
