Carassius gibelio (silver crucian carp): 127975669
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Entry
127975669 CDS
T08819
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127975669
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127975669
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
127975669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
127975669
NCBI-ProteinID:
XP_052435675
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All DBs
Position
A4:complement(27787514..27812409)
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AA seq
796 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGREFSKSGHEGAVEAMRKDPIVVQVLGPSSQNPNS
LQEVCVVDVCTQTDITFEHIMALAKMRPTTPPVPDICPFLLSDSCHSIQTMEHEYFDCPE
YVASTQAEVDRAVEFECEEVELCRMNSQEKLGLTLCYRTDDEDDIGIFVGQVELNSIAAR
DGRIREGDRILQINGHDVQNREEAVALLSNENSRSIVLLVTRPEGQMDGSWLDEDHQDFL
EELKMEILEEQKEEGILQTAGCVKRSKRYEDASGSTDTATCSSTILEKDSGVKCSFEESS
ECESLFHPQTWTQKQFRDRWEAGSHLVPMDTVGLNRQEKAQEGRLSENGVECDHFQQLLE
LKCQIRNGGECGLVYRRSSTIECSLTEQGGSGVARELHMLNEELRSIERECQSIMQAHQL
RRSKHDSPRMDKENRLRRGKLADITEYPERLQSEKLRDKDSSSAYNTAESSRSTPLGTEC
SPDHSLQPRVHMTNQRNLQSTQQLQTPYSSPILSLPSQSSPTCSRAHTYTSSTPPLQTPI
TSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKERNRNRVAAAHHYHSPYHSNT
TTQPTSTRHYQSYLQLLQQHSSSSLEYSQSQLSLLSLRGRAGPTPPGRLEWKVKVRADGT
RYVARRPARDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARAREQR
RRREFMQRSRLECLRETMGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSHGARA
PEGTKVHNAFLSVTTV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacctgtgcacgctgcagaaaagagaggagcactacaagctgctgtatgag
atcgcacaggtgaatgggcgtgaattttccaagtctggacatgagggagcagtggaggcc
atgcgcaaggatcccattgtggtgcaggtgttggggccctcgtcccagaacccaaacagc
ctacaggaagtgtgtgtggtggatgtgtgcactcagacagacatcacatttgagcacatc
atggctctggctaagatgagacccaccaccccaccagtgccagacatctgccccttcctg
ctgtcggacagttgtcattccattcagaccatggagcatgaatattttgattgtcccgaa
tatgtggccagcacacaggcagaggtggacagggcagttgaatttgagtgtgaggaggtt
gaactctgtcgaatgaacagccaggaaaagctgggtcttactctctgttaccggactgat
gatgaggacgatataggcatttttgttggtcaggtcgagctcaacagcatagctgcgagg
gatggacgcatcagagagggagacagaattttacagataaatggtcatgatgtgcagaac
agggaagaggctgtcgctcttctctcaaatgaaaattccagatccatagtgttgcttgtc
accagacctgaaggacagatggatggaagctggctcgatgaggaccatcaagatttccta
gaggagctgaagatggagattttagaagaacagaaagaggagggaattcttcaaacagca
ggttgtgtaaagcggtctaaaagatatgaggatgcctcaggaagtactgatacagctaca
tgttcctcaaccattctggagaaggacagtggtgtaaaatgcagctttgaggaaagctct
gaatgtgaatcgctctttcatccccaaacatggactcaaaaacaatttcgggataggtgg
gaagcgggctctcatttggttcctatggacaccgttggcttaaacaggcaggagaaggct
caggaggggaggttgagcgagaatggggtggagtgtgaccattttcagcaactcttggag
ctcaagtgccagatccgtaatggtggagaatgcgggttggtctacaggcgaagcagtact
atcgagtgcagcctgacggagcagggtggaagcggagtggcacgggagctgcacatgctc
aacgaagagctgcgtagcattgaacgtgagtgccagagcatcatgcaagcccaccagctg
cgcaggagcaagcacgactctcctcgaatggataaagaaaatcgactgcgtcgtggcaag
cttgcggatattactgagtatcctgagagactacaaagtgagaagctcagagataaagac
agctctagtgcctacaatacggctgaaagttcccgttcaactccactgggaaccgaatgt
tcaccagatcactctctacagcctcgggtccatatgaccaaccagaggaaccttcagagt
acccaacaattgcagactccctacagtagtcccatcttgtcattacccagccaaagtagc
cctacttgcagtcgtgcccatacgtacaccagctccacaccacccttacagacccccatc
accagtcctggttcacaaggacccagtcaggccttctccagcagcttggagcaaagcccc
agcaacccttcggagtcagatccagcgcttccagctgatgatgagcgctgtgagaaagaa
agaaaccggaatagggttgcagccgctcatcactaccattcgccctaccacagcaacacc
acaacccagcctaccagcacaagacactaccagagttacctacagctcctacaacagcat
tcctcttcctctcttgagtactcccagagccagcttagcctcctcagccttcgtggacgg
gctggacccacgccacctggcaggcttgaatggaaggtcaaagtgcgagcagacggaacc
aggtatgtggcacgtaggcccgcaagagatcgcatcctgcgcgaacgagccttacggatc
cgagaggaacgcagcggtgggatgactacagatgacgacgcagtcagcgagttgaaaatg
ggtcgatactggagtaaagaagaacgtaagcagcagctagcacgggccagagaacagcgg
cgcaggagagagttcatgcagaggagccggcttgagtgcctcagagagaccatggggacg
gcaagtggagaggtcagcatcctggagctcagtcacaagaagatgctgaagaagcgaaac
aagaagatccttgacaactggatgaccattcaagagctcatgagccatggagcacgagcc
cctgagggtaccaaagttcacaacgccttcctttctgtcaccacagtatag
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