Carassius gibelio (silver crucian carp): 127979277
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Entry
127979277 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127979277
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127979277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
DUF1043
DUF4407
Y1_Tnp
Laminin_II
DivIC
Motif
Other DBs
NCBI-GeneID:
127979277
NCBI-ProteinID:
XP_052440585
LinkDB
All DBs
Position
B19:complement(10046778..10076713)
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AA seq
541 aa
AA seq
DB search
MAEASVFSVEQFSCPVCLDLLKDPVAIPCGHSYCMNCITDCWDQEDQKRVYSCPQCRQTF
SPRPALAKNTILAEVVEKLKKTKLKAAVPAGSGDVECDICTGRKHKAVKSCLVCLESYCQ
THFERHEEFRSGKRHKMTDATGRLQQMICQKHEKLLEVFCRTDQQCVCILCAMDEHKNHE
TVSTAAERTEKEKHLKETQSEIQQRIQQRQKDLEQLRDAVESHKRSAQTAVEDSESIFTE
LIRSIERSRSEVTQRIRDQEKTAVSRAEGQMERLEQEIEDLKKRNTELEQLSHTDDHIHF
LQSLQSLSAPPESTENISDSFLFSFDGVRESVRQLRLKLEDFCKEEMKKISVSNIVPRSR
EDFLQYRHQFTLDPNTAHKHLCLSEGNRLVTYTPYTAQPYPDHPDRFDGCFQVLCRESVS
GRCYWELEWSGSVVFISVSYKSISRKGSFNECVFGGNDQSWRLRCSSSSFSFCHDNKQTK
LPVSSSCRRIGVYVDHRAGTLSFYSVSDSMNLIHTVQTTFTQPLYPGFIVGDSVKLSDLT
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtgttttttcagtggagcagttcagctgtccagtgtgtctggatctc
ctgaaggatcctgtggccattccctgtggacacagttactgtatgaactgcattacagac
tgctgggatcaagaggatcagaagagagtctacagctgtcctcagtgcagacagaccttc
agtccaagacctgctttagctaaaaacaccatactggctgaagtggtggagaaactgaag
aagaccaaactaaaagctgctgttcctgctggatctggagacgtggagtgtgacatctgt
actggaagaaaacacaaagctgtcaagtcctgtctggtgtgtctggagtcttactgtcaa
actcactttgagcgtcatgaagagtttcgttcaggaaagagacacaaaatgactgatgcc
actggacgactgcagcagatgatctgccagaaacatgagaagcttctggaggttttctgt
cgtactgaccagcaatgtgtttgcattctgtgtgcaatggatgaacataaaaaccacgag
actgtgtcaactgcagcagagaggacagagaaagagaaacacttgaaggagacacagagt
gaaatccagcagagaatccagcagagacagaaagatcttgagcagctgagagacgctgtg
gagtctcataagcgctctgcacagacagcagtggaggacagtgagagcatctttactgag
ctcatccgctccattgagagaagccgctctgaggtgacacagcggatcagagatcaggaa
aagactgcagtgagtcgagctgaaggacaaatggagcgactggagcaagagattgaagat
ctgaagaagagaaacactgagctggagcagctttcacacacagacgatcacatccatttc
ctgcagagtcttcagtctctctcagctcctcctgaatctacagaaaacatctctgacagt
ttcctcttttcttttgatggagtgagagaatctgtccgtcagctgagactcaaactggag
gatttctgcaaagaggagatgaaaaagatatctgtcagtaacattgttcccaggagcaga
gaggacttcctacaatatcgtcatcagttcactctggatccaaacactgcacataaacat
ctctgtctgtctgaagggaacagattggtgacttacacaccttacacagctcagccgtat
cctgatcatccagacagatttgatggttgttttcaggtgttgtgtagagagagtgtgagt
ggacgctgttactgggagctggagtggagtgggagtgttgtgtttatatcagtgtcatat
aagagcatcagcaggaagggatcttttaatgagtgtgtgtttggaggtaatgatcagtcc
tggagactgcgctgctcttcctctagtttctcattctgtcacgataacaaacagactaaa
ctccctgtttcctccagctgcaggagaataggagtgtatgtggatcacagagcaggaact
ctgtccttctacagcgtctctgactcaatgaacctcatccacacagtccagaccacattc
actcagccgctatatcctgggtttattgttggggattcagtcaaactctctgatctgaca
acataa
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