Carassius gibelio (silver crucian carp): 127979279
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Entry
127979279 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127979279
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127979279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_5
Y1_Tnp
Laminin_II
DUF4407
DUF1043
Motif
Other DBs
NCBI-GeneID:
127979279
NCBI-ProteinID:
XP_052440588
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All DBs
Position
B19:complement(10046778..10126442)
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AA seq
540 aa
AA seq
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MAEASVFSVEQFSCPVCLDLLKDPVTIPCGHSYCMSCITDCWDQEDQKRVYSCPQCRQTF
SPRPALAKNTMLAEVVEKLKKTKLKAAVPAGSGDVECDICTGRKQKAVKSCLVCLESYCQ
THFERHEEFRSGKRHKVTDATGRLQQMICQKHEKLLEVFCRTDQQCVCMLCAMDEHKNHE
TVSTAAERTEKEKHLKETQSEIQQRIQQRQKDLEQLRDAVESHKRSAQTAVEDSERIFTE
LIRSIERSRSEVTQRIRDQEKTAVSRAEGQMERLEQEIEDLKKRNTELEQLSHTDDHIHF
LQSLQSLSAPPESTENISDSFLFSFDGVRESVRQLRLKLEDFCKEEMKKISVSNIVPRSR
EDFLQYRHQFTLDPNTAHKHLCLSEGNRLVTYTYTAQPYPDHPDRFDYYRQVLCRESVSG
RCYWELEWSGTGVNISVSYKSISRKGSGNECVFGGNDQSWRLFCSSSSVSFWHDNKQTKL
PVPSSCRRIGVYVDHRAGTLSFYSVSDSMNLIHTVQTTFTQPLYPGFMVGDSVKLSDLTT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtgttttttcagtggagcagttcagctgtccagtgtgtctggatctc
ctgaaggatcctgtgaccattccctgtggacacagttactgtatgagctgcattacagac
tgctgggatcaagaggatcagaagagagtctacagctgtcctcagtgcagacagaccttc
agtccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactgaag
aagaccaaactaaaagctgctgttcctgctggatctggagacgtggagtgtgacatctgt
actggaagaaaacagaaagctgtcaagtcctgtctggtgtgtctggagtcttactgtcaa
actcactttgagcgtcatgaagagtttcgttcaggaaagagacacaaagtgactgatgcc
actggacgactgcagcagatgatctgccagaaacatgagaagcttctggaggttttctgt
cgtactgaccagcaatgtgtttgcatgctgtgtgcaatggatgaacataaaaaccatgag
actgtgtcaactgcagcagagaggacagagaaagagaaacacttgaaggagacacagagt
gaaatccagcagagaatccagcagagacagaaagatcttgagcagctgagagacgctgtg
gagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgag
ctcatccgctccattgagagaagccgctctgaggtgacacagcggatcagagatcaggaa
aagactgcagtgagtcgagctgaaggacaaatggagcgactggagcaagagattgaagat
ctgaagaagagaaacactgagctggagcagctttcacacacagacgatcacatccatttc
ctgcagagtcttcagtctctctcagctcctcctgaatctacagaaaacatctctgacagt
ttcctcttttcttttgatggagtgagagaatctgtccgtcagctgagactcaaactggag
gatttctgcaaagaggagatgaaaaagatatctgtcagtaacattgttcccaggagcaga
gaggacttcctacaatatcgtcatcagttcactctggatccaaacactgcacataaacat
ctctgtctgtctgaagggaacagattggtgacttacacttacacagctcagccgtatcct
gatcatccagacagatttgattattatcgtcaggtgttgtgtagagagagtgtgagtgga
cgctgttactgggagctggagtggagtgggactggtgtgaatatatcagtgtcatataag
agcatcagcaggaagggatctggtaatgagtgtgtgtttggaggtaatgatcagtcctgg
agactgttctgctcttcctctagcgtctcattctggcacgataacaaacagactaaactc
cctgttccctccagctgcaggagaataggagtgtatgtggatcacagagcaggaactctg
tccttctacagcgtctctgactcaatgaacctcatccacacagtccagaccacattcact
caaccgctatatcctggatttatggttggggattcagtcaaactctctgatctgacaaca
taa
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