Carassius gibelio (silver crucian carp): 127986301
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Entry
127986301 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127986301
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127986301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
U-box
Phage_int_SAM_5
zf-RING_10
zf-RING_5
zf-RING_6
DUF4407
DUF1043
MRP-S31
OmpH
Motif
Other DBs
NCBI-GeneID:
127986301
NCBI-ProteinID:
XP_052444536
LinkDB
All DBs
Position
B21:29288540..29291835
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AA seq
572 aa
AA seq
DB search
MSLYLSSKMAEARISVDQKEFMCAVCLDLLKDPVAIPCGHSYCKICITGCWDQEDQKRVY
SCPQCRQTFSPRPALARNTMLAEVVEKLKKTRLSADCEAGAGDVQCDVCTGRKYKAVKSC
LMCLESYCQNHFDRHEEFHSRKPHKVTEATGRLQEMICQKHEKILEVFCRTDQKCICMMC
TVIEHKNHDIVSAADQRTEKQKQLKETQKTLQQRIQQREKDLQQLRETVESHKRSAQTAV
EDSERIFTELIRSIERSRSELIRLIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQL
SHTQDHIQFLQSFQSLSAPPESTDVNDDLFSSLFSSDDLRESVHQLRDKLEDFCKEEIKK
ISDRVTFTNIDPRTRNDFLQYSHQLTPDLNTVNKHLRLSENNRVITYTDTVQSYPDHPDR
FDYWYQVLCRESVCGRCYWELEWSGDSVCISVSYKSIGRKGSGVECVFGFSDESWSLFCS
SSSYSFRHNNIETALSVKPISSRIGAFEYIRRVVVYDDDFRRIGVFVDHRAGTLSFYSVS
DTMSLIHTVQTTFTQPLYPGFWVYKGSSVKLC
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtatttaagcagtaaaatggcagaagccagaatttcagtggatcagaaggaa
ttcatgtgtgcagtgtgtctggatctcctgaaggatccagtggctattccctgtggacac
agttactgtaagatctgtattacaggctgctgggatcaggaggatcagaagagagtctac
agctgtcctcagtgcagacagaccttcagtccaagacctgctttagctagaaacaccatg
ctggctgaagtggtggagaaactgaagaagaccagactctctgctgactgtgaggctgga
gctggagatgtgcagtgtgacgtctgtactggaagaaaatacaaagccgtcaagtcctgt
ctgatgtgtctggagtcttactgtcagaatcattttgaccgtcatgaggagtttcattca
cgtaaaccacacaaagtgactgaagccactggacgactgcaggagatgatctgccagaaa
catgagaagatcctcgaggttttctgtcgcactgatcagaagtgtatatgtatgatgtgt
acggttattgaacataaaaaccatgacattgtatcagctgcagatcagaggacagagaaa
cagaagcagctgaaggagactcagaagacgctccagcagagaatccagcagagagagaaa
gatctccagcagctgagagagactgtggagtctcataagcgctctgcacagacagcagtg
gaggacagtgagaggatctttactgagctcatccgctccattgagagaagccgctctgag
ctgatacgactgatcagagatcaggaaaagactgcagtgagtcgagctgaaggacgactg
gagcgactggagcaggagatcaatgatctgaggaggagagacgctgagctggagcagctt
tcacacacacaggatcacattcagttcctgcagagtttccagtctctctcagcacctcct
gaatctacagacgtaaatgatgatctcttcagttctctcttctcttctgatgatctgaga
gaatctgtccatcagctgagagacaaactggaggatttctgcaaagaggagatcaagaag
atctcagacagagtcacattcaccaacattgatcccagaaccaggaacgacttcctacaa
tattcccatcagctcactccggatctgaacacagtgaataaacacctccgtctgtctgag
aacaacagagtgattacttacactgacacagtccagtcttatcctgatcatccagacaga
tttgattattggtatcaagtgttgtgtagagagagtgtgtgtggacgctgttactgggag
ctggagtggagtggagatagtgtgtgtatatcagtgtcatataagagcatcggcaggaag
ggatcgggtgttgagtgtgtgtttggatttagtgatgagtcctggagtttgttctgctct
tcctctagttactcattcagacacaataacatagagactgctctctctgtgaagcccatc
agcagtagaataggagcgtttgaatatatcaggagagtagtggtgtatgatgatgatttc
aggagaataggagtgtttgtggatcacagagcaggaactctgtccttctacagcgtctct
gacacaatgagcctcatccacacagttcagaccacattcactcagccgctctatcctggg
ttttgggtttataaaggatcgtcagtgaaactgtgttga
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