Carassius gibelio (silver crucian carp): 127986331
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Entry
127986331 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127986331
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127986331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
Prok-RING_4
DUF1043
DUF4407
OmpH
MRP-S31
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
127986331
NCBI-ProteinID:
XP_052444580
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All DBs
Position
B21:complement(29102454..29109674)
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AA seq
560 aa
AA seq
DB search
MSLYLSSKMAEARISVDQKEFLCAVCLDLLKDPVAIPCGHSYCKSCITGCWDQEDQKRVY
SCPQCRQTFSPRPALARNTMLAELVEKLKKTRLSDDCYAGAGDVQCDVCTGRKYRAVKSC
LVCLESYCQSHFDRHEEFHSRKPHKVIEATGRLQDMICQKHEKLFEVFCRTDQKCICVLC
TIIEHKNHDIVSAADQRTEKQKQLKETQKTLQQRIQQREKDLQQLRETVESHKRSAQTAV
EDSERIFTELIRSIESSRSELIRLIRDQEKTAVSRAEERLERLEQEINDLRRRDAELEQL
SHTQDHIQFLQSFQSLSAPPESTDVNDDLFSSLFSFDDLRESVHQLRDKLEDFCKEEIKK
ISDRGKVLEIHLLSETIIRTRKDFLQYSHQLTPDLNTVNTRLRLSENNRVITFTNTVQSY
TDHPDRFDVYPQVLCRESVCGRCYWEIEWSGDRGVHISVSYKNIGRKGSGVECGFGRNDQ
SWSLFCSPFSYSFRHNKIKTVLSVKPISSRIGVFVDHSAGTLSFYSVSDTMSLIHTVQTT
FTQTLYPGFYVGSGSSVKLC
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtatttaagcagtaaaatggcagaagccagaatttcagtggatcagaaggag
ttcttgtgtgcagtgtgtctggatctcctgaaggatccagtggctattccctgtggacac
agttactgtaagagctgtattacaggctgctgggatcaggaggatcagaagagagtctac
agctgtcctcagtgcagacagaccttcagtccaagacctgctttagctagaaacaccatg
ctggctgaactggtggagaaactgaagaagaccagactctctgatgactgttacgctgga
gctggagatgtgcagtgtgacgtctgtactggaagaaaatacagagccgtcaagtcctgt
ctggtgtgtctggaatcttactgtcaatctcattttgaccgtcatgaggagtttcattca
cgtaaaccacacaaagtgattgaagctactggacgactgcaggatatgatctgccagaaa
catgagaagctctttgaggttttctgtcgcactgatcagaagtgtatatgtgtgctgtgt
acgattattgaacataaaaaccatgacattgtatcagctgcagatcagaggacagagaaa
cagaagcagctgaaggagacacagaagacgctccagcagagaatccagcagagagagaaa
gatctccagcagctgagagagactgtggagtctcataagcgctctgcacagacagcagtg
gaggacagtgagaggatctttactgagctcatccgctccattgagagcagccgctctgag
ctgatacgactgatcagagatcaggaaaagactgcagtgagtcgagctgaagaacgactg
gagcgactggagcaggagatcaatgatctgaggaggagagacgctgagctggagcagctt
tcacacacacaggatcacatccagttcctgcagagtttccagtctctctcagcacctcct
gaatctacagacgtaaatgatgatctcttcagttctctcttctcttttgatgatctgaga
gaatctgtccatcagctgagagacaaactggaggatttctgcaaagaggagatcaagaag
atctcagacagaggtaaagtcctggagattcatctgctctcagaaaccatcatcaggacc
aggaaggacttcctacaatattcccatcagctcactccggatctgaacacagtgaataca
cgcctccgtctgtctgagaacaacagagtgattacattcactaacacagtccagtcgtat
acggatcatccagacagatttgatgtgtatcctcaggtgttgtgtagagagagtgtgtgt
ggacgctgttactgggagattgagtggagtggagatagaggtgtgcatatatcagtgtca
tataagaacatcggcaggaagggatcgggtgttgagtgtgggtttggacgtaatgatcag
tcctggagtttgttctgctctcccttcagttactcattcagacacaataagataaagact
gttctctctgtgaagcccatcagcagtagaataggagtgtttgtggatcacagtgcagga
actctgtccttctacagcgtctctgacacaatgagcctcatccacacagtccagaccaca
ttcactcagacgctctatcctgggttttatgttggttctggatcatcagtgaaactgtgt
tga
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integrated database retrieval system
