Carassius gibelio (silver crucian carp): 127989687
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Entry
127989687 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127989687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127989687
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127989687
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127989687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Baculo_IE-1
zf-B_box
zf-RING_4
DUF702
GIY_YIG_2
Motif
Other DBs
NCBI-GeneID:
127989687
NCBI-ProteinID:
XP_052447404
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All DBs
Position
A5:complement(5894169..5908370)
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AA seq
661 aa
AA seq
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MATPTSLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSYGSTMGLMCKSCKKRLPRQYCSDCSIVLCDI
CKNDGHQCQGHVVQAIRVAAEQRRKDISGKLSNMREAMGNIQKKKAVIDNVTKSIKLKYK
AVQQEYAKAELQLQEELGRSRRAFATSLAEIEKLNAQILEEQTYLLNIAEVQVVSRCDYL
TMRIRQTDIALLEEASNHEEEELDLKTNLNVILKLQEPEFVQMECSKPLDVGQLTTKPCI
VNAEEKAGLDFTTSTATLVDIYRDIDMDTAVDEAVCASPGSFKSKSVDGGGPSPGASGGQ
LCQFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIFNRKGFQREIRRNPSS
IDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIKPW
GIAAMPSGQFVVSDVEGGKLWCLAVDRNVGIVNYNRLCSALRPKFVTCDSSGTVYFTQGL
GLNIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSENEDFRCITGMCVDSNGDLIVTD
SGRKEILQFPKEGGYNILIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSST
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaacgtctcttgatccagatttggttcgggaggtgctggaatgccccatt
tgcttggagacgtacaaccaggatcagcttcgacccaaactgctgcagtgcggtcactca
gtttgtcgtcagtgccttgagaaactcctcgccagcacgataaatggcgttcgctgcccc
ttctgcagcaaggtttctcgtatgagcagtatttcccagctggctgacaatctcactgtg
ttgaagatcattgactgtgctagttcatacggctctacaatgggtctcatgtgcaagtct
tgtaaaaaacgcctgccacggcagtactgcagtgactgcagcattgtgttgtgtgatatt
tgtaaaaacgatggccaccagtgtcagggtcatgttgtacaggccattcgcgtggctgct
gaacagcgccggaaggacatcagtgggaagctttctaacatgcgggaggcaatgggaaat
attcagaagaagaaggcagttattgacaatgtgacaaaatcaatcaaactgaagtataag
gctgtacagcaggaatatgccaaggctgagttgcagctccaagaggaacttggccgctcg
cgccgtgcctttgccacctccttggctgaaatagagaaactcaatgcccagatactggag
gagcagacgtacctgctcaatattgctgaagtgcaggtggtgtcaaggtgtgactatcta
accatgaggatcaggcagacggatattgctctactggaagaagcgagcaaccatgaagaa
gaagagttggacttaaaaactaacttgaatgtcattctgaaactacaagaacctgaattt
gttcaaatggagtgctcgaaacccctggacgtggggcagctgaccacaaaaccctgcatt
gtcaatgcagaggaaaaagctggacttgatttcaccacttcgactgccaccctagttgac
atttaccgtgatattgacatggatacagcagttgatgaagctgtttgcgcttctcccggt
agcttcaagtccaagtctgttgacggtggtggaccttctccaggagcttctggtgggcaa
ctctgtcaatttgtgaaaaagatgggctgcaagggcaatctgccgggcatgttcaatttg
ccagtaagcatttgcgtcacgccacagggtgaggtgcttgtggccgaccgaggaaactac
cgcatccagatcttcaaccgcaagggcttccaaagggagatacggcgcaacccaagcagc
atcgacaacttcgtcttgagcttcctaggtgccgacctgcccaacctcatcccactttcc
attgcaatcactgctcagggcctcataggtgtcactgacaactatgataactccgtgaag
gtttataccaccgatggccactgcatcgcctgtcacaagaaccagctcatcaagccatgg
ggaatcgcggccatgccttcaggccagttcgttgtgtcagatgtagaggggggaaagctg
tggtgcctagccgtggatcgtaacgtaggtattgtgaattacaaccgcttatgttcggcc
ctcaggcccaaatttgtaacttgcgactcctcaggtacagtctacttcacacagggtttg
ggtctaaacatagagaatagacacaatgaacaccaccttgaggggggtttttcaattggg
tcggtgggaatggatggccagctgggaaagcaactcagccacttcttctcagagaatgag
gacttccgatgcattaccggcatgtgtgtggactctaatggagacttgatcgtgacagac
agtggccgtaaggagatactacaattccctaaagaaggtggctataatattctcattcag
gaggggttaacatgccctgtaggggttgcagttacacagaagggacaactgcttgtctta
gattgctgggaccactgtgtgaaggtctacacttacttgcaaaggagacgttcctctaca
tgttaa
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