Carassius gibelio (silver crucian carp): 128015594
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Entry
128015594 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
128015594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128015594
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128015594
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128015594
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128015594
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128015594
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128015594
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UBA_4
Motif
Other DBs
NCBI-GeneID:
128015594
NCBI-ProteinID:
XP_052455502
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Position
A6:18081677..18111232
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AA seq
859 aa
AA seq
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MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNSFLGFGREHVER
HYHKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGVDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVSIACDAVLNASSPYKKQEADSWEEEIQVSRHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETNFPLAVK
LDTITPDGADIYSFDEEEAVLDPDISEHLLHFGIDMLQMQKTENGHHTDNHVQPRLSDWE
VIQESSVKLKPVYGSGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPVKSELIEQVMKEEYKQQQRGISPKMFKALVSKGHP
EFSSNRQQDAHEFFLHLINLVERNNSGSENPSDVFRFLVEERVMCCQTQKVRYTQRVDYL
MQLPVPLEAASNREELIAYESKRQEAEENMRPPPEPVRARIPFTACLQAFTEPENVPDFW
SSALQAKSAGVKTSRFASFPEYMVMQIKKFTFGVDWVPKKLDVSVDVPDFLDLNRLRATG
LQTGEAELPDLTPPIVIPENTRGTTTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLANPTYMEPDLPGPSFPTISALGNQPPEESISILTS
MGFPRHHTIQALKATNNNLERALDWIFTHPDCEDESEAMSDTTDTELNNNSFSNANAHSD
SSLSPDQDLSSPRVRDGPGRYELFAFISHMGSSTMSGHYVCHIKKEGRWLIYNDHKVCLS
ERPPKDLGYMYFYRRLSSF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatttgggagagctactggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagcgaatgcgctttttcctacgactcacctgaatcagaa
ggaggtctgtatgtgtgtatgaactcattcctgggtttcggaagagaacatgtggagaga
cattaccataaaactggacagagtgtgtacatgcacttaaaacgacatgtaaaagagaaa
gccacaggtgctgcagggggtgccataccaagaagaagaaacggaaaagtatttttagat
ttagagcttaaccgtgattttaatggagttgattatgagtatgaagatgaggcaaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggagttgcccgcactg
gtttcaatagcctgtgatgccgtcctcaatgcttcatctccatacaaaaagcaggaggct
gattcatgggaagaggagatccaagtatctagacatgccagaagccttagacagcaggag
aatggggttcgaattcctcccagtggctggaagtgcgccaagtgtgaaatgagagagaac
ttgtggctgaacctgacggatggctctgttctctgtgggaagtggttctttgatgggagt
ggagggaacggacatgcccttgagcactacaaagaaaccaacttccctctggcagttaaa
ctcgacacaatcaccccagacggagcagatatttattctttcgatgaagaagaagcggtg
cttgatcctgacatatcagaacatttgttacactttggaatagatatgctgcaaatgcaa
aaaacagagaatggccatcatacagacaaccacgtgcagccacgtctgagtgactgggaa
gtgattcaggagtccagtgtaaagctaaagcctgtctatggctcgggatacacaggcatc
aaaaacctgggcaacagctgctacctgagcaccactatgcaagtgcttttcagtattcca
gagttccagagagcgtatgttgggaacctacagagaatatttgactactcacccctagac
ccaactcaggatttcagcacacaaatggcaaaactcggtcatggacttctctcaggccag
tactcaaaacctccagttaaatcagaacttattgaacaggtgatgaaagaagaatacaag
cagcagcaaagagggatttcgcctaagatgttcaaagcgctggtcagtaaaggacatcca
gagttctcctcaaaccggcaacaagatgctcatgaattctttctgcacttaattaacctg
gtggagaggaacaattcaggctcagagaaccccagcgatgtgttccgcttcttagttgag
gagcgagtgatgtgctgtcagacacagaaggtgcggtacacacagcgagtggactacctc
atgcagcttcctgtacccttagaggctgccagcaacagagaggagttgatagcatatgag
agtaagcgacaggaagctgaggagaacatgcggccccctccagagccggtgagagcccga
atccccttcactgcctgtctgcaagccttcactgagcctgagaatgttccagacttctgg
agctctgcactgcaagccaagtctgctggagtcaagacttctcgtttcgcatctttccca
gagtacatggtcatgcaaataaagaagttcacatttggggttgattgggtgcccaaaaag
ttagatgtttctgtagatgtacctgatttcctggacttgaatcgcctccgggccacaggg
ttacagactggagaagcagaactgcctgaccttacacctcccattgtcattcctgaaaat
accagaggcactacaacaaacaactctttggaatctccagaaatagatgaatcatccgtg
atgcagctggcagagatggggttccctctggaagcctgtcggaaggcagtgtactacact
gggaatatgggggcagagatggcctttaactggataatagcacacatggaagagccagat
tttgcagagcctctggcaaatcccacttacatggaaccagaccttcctggtcccagcttc
cctactatcagtgcgctgggcaaccaacctccagaagagagcatctccatcctcacctcc
atgggcttccccagacatcacacaatccaggctctcaaagccacaaacaacaacttagag
cgagctcttgactggatattcacacacccagactgtgaggacgagagtgaggctatgtca
gacacgacagacacagagctgaacaataacagcttctcaaacgccaatgcccacagcgac
tcctcgctgtctccagatcaggacctgtccagcccccgtgtcagagacggacccgggcgt
tacgaactgtttgctttcatcagtcacatgggatcatccacaatgtctggtcattatgtg
tgccatataaaaaaagagggcagatggctgatttacaatgatcacaaagtatgtttgtca
gagaggccccctaaagacttgggctacatgtacttctaccgtcgcctgtcaagcttctag
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