Carassius gibelio (silver crucian carp): 128016435
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Entry
128016435 CDS
T08819
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128016435
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
128016435
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128016435
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
128016435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
DUF5050
cEGF
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
128016435
NCBI-ProteinID:
XP_052456888
LinkDB
All DBs
Position
A7:complement(3264635..3358814)
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AA seq
1914 aa
AA seq
DB search
MRLTAVLCGSLLTFMLLVEGVLGAAECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDCG
DHSDEDGCILPTCSTLDFHCDNGKCIRRSWLCDGDNDCEDDSDEQDCPPRECEEDEFHCQ
NGYCIRSLWYCDGDNDCGDNSDEQCDKRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGTD
EENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSAEFMC
SSGMCINAGWRCDGEFDCDDQSDEKNCSTSMCMADQFRCTSGRCVRLSWRCDGEDDCSDN
SDEEGCEKTETPPCASDQFLCGNGRCIGQRKVCNDVKDCEDGTDEHPHQDCRSKSSEENC
SVNNGGCSQKCQMSRGLVQCTCHTGYMLTQDGKTCRDVDECADEGYCSQGCTNMEGGFHC
WCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHS
KELVFWSDVTLDRIMRASLNGSNVEEVVSTGLESPGGLAIDWIHNKLYWTDSGTSRIEVA
NLDGTQRKVLLWQRMEKPRAIALHPMEGKIYWTDWGNTPCIEYANMDGSNRKIIADTHLF
WPNGLTIDYASHRMYWVDAKHHIIERADLDGKNRKAVISQGLPHPFAITVFEDSLYWTDW
HTKSINSANKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGSNNGGCSHLCLPSN
KTYTCACPTGFKKVDHYNCGLSLDKFLLFARRTDIRRISFDTEDKLDDVIPLTDIRNAVA
LDWDSSERYIYWTDVTTDSINRAKWDGSKQEVVVDTSLESPAGLAIDWLTHKLYWTDAGT
DRIEVSNTDGSMRTVLIWENLDRPRDIVVDPIGGFMYWTDWGANPKIERAGMDASNRMVI
VSTNLTWPNGLAIDYSTERLYWADASIKTIEYGNFDGSGRQVLIGSQLPHPFGLTLHEDR
IYWTDWQSKSIQSADKLTGLDRRTLAENLENLMDIHMFHHHRTTVQTPCSVNNGGCSHLC
LLAPAPKGSSCGCPTGINLQADGKTCTHAMNSFLVFARRTDVRMISLDIPYFADVVLPVT
VSMKNTIAIGVDAVEGKVYWSDSTLKKISRANINGSEYEDIISTGLMTTDGLAVDSVGRK
IYWTDTGTNRIEVANLNGSMRKVLVWQNLDSPRAIALFHEMGYMYWTDWGEHAKLERSNM
DGSDRVVLINNNLGWPNGLAVDKAGSQLLWADAHTERIEASDLNGSNRRTLVSPVQHPYG
LTLLGPHMYWTDWQSRSIHRADKDTGANTITVRSNLPGLMDIQAVDRARALGFNKCGRRN
GGCSHLCLPRHNVTSCACPTGILLRSDGRSCDNLPETFLLFSNRVSVRRISLDTNDHTDV
YVPVPELHNVISLDYDSVERKLYYTDVSLDVIRRVDLDGSNMETVISQGLKTTDGLAVDW
VARNMYWTDTGRNTIEVAHLDGTSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKIE
RAYLDGTDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQILISPVS
HPFALTQLKPVYSPLTPFSRISQQDRWIYWTDWQTKSIQRVDKHTGRSKETVLANLEGLM
DIIVVSPQRQTGTNHCGVNNGGCTHLCLARSNSFVCACPDEPDGRPCSTISGYIPTAPEK
DSKGTQAPKKHPTQKPRQGLSGGNCTDASLNLEDCIQNSVVSAPRDESPHISYVIGGALS
ILAILILIAAFLIYRHKKFKFAEPGVSNLTYSNPSYRTSTQEVKIETAQKPAINNQLRYK
KEVQGVCDAGYTKEKIRIVEGVCLLSGEDLYWEDLRQLKVCRGAGLQACMRTDTVSLQAS
SASLNDGETEQLLQGDQSECSSLSTAHAVTAPHHSTHPDTGWVPNRKTSTESEV
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcaccgcggtgctttgtggcagtcttctaactttcatgctcctcgtcgaaggt
gttttaggtgctgccgaatgctcgtgtggaagaaatcacttcacatgtgcggtcagtgcg
tttggtgagtgcacgtgtatcccggcgcagtggcagtgtgatggtgacaatgactgcgga
gatcacagcgatgaagatggatgcatattgcccacatgctcaacattggactttcactgc
gataacggaaaatgcatccggcgctcgtggttatgtgatggagacaacgactgtgaggat
gactccgatgaacaagactgtcctccacgagaatgtgaggaggatgagtttcattgtcag
aatggatactgtatccgcagcctgtggtactgtgatggagacaatgactgtggagataac
agtgacgagcagtgcgataagaggaagtgctctgataaagagttccgctgctctgacgga
agctgcatcgcagaacactggtactgtgatggagacaccgactgcaaagatggaaccgat
gaagagaattgcccgtctgacgtgatgacggccacatgcagtgttgaggagtttcagtgt
gcatacggccgctgcatcctggacatctaccactgcgatggagatgacgactgcggggac
tggtctgatgagtcggactgctcctcccaccagccctgccgttctgcagagttcatgtgc
agcagtggcatgtgcatcaatgcaggctggaggtgtgacggagaattcgactgcgatgac
caatcagatgaaaagaactgcagtacgtcgatgtgcatggctgatcagtttcgctgtacg
tctggtcgatgtgtgcgcttgtcctggcgctgtgatggggaggatgactgctctgataac
agtgatgaagaaggctgtgaaaagacagaaactcctccatgtgcatcggatcagttcctg
tgtggaaacggccgctgtattggtcagcgcaaggtctgtaatgacgtcaaggactgtgaa
gatgggactgatgagcatccacaccaggactgtcgctccaagtcgagtgaagagaactgc
agtgttaacaatggaggctgctcgcagaaatgccagatgtctcgaggtctggtgcagtgc
acttgtcacaccggctacatgttaactcaggacgggaagacgtgcagagatgttgatgag
tgtgcagatgaaggttactgtagtcaaggctgtaccaacatggaaggaggatttcactgc
tggtgtgtgcaaggttacgagcttcgacccgacaaacgcagctgcaaagctttgggtcca
gaaccggttttgttgtttgcgaatcggattgatatccgtcaggttctgccgcaccgctca
gagtacacgctgttactgaataatctggaaaacgccatcgcgttggactttcatcatagc
aaagagctggtgttctggtcagacgtgacactggaccgcatcatgagagccagtctgaac
ggtagtaatgtggaggaggtcgtgtccacgggtctcgagagcccaggtggtctggccata
gattggattcataataagctctactggactgactcgggaacgtctcgcattgaagtggcc
aatctggatggcacccaacgtaaagtgcttttatggcagaggatggagaaaccccgtgct
atcgctctgcatcctatggaagggaagatttactggactgactggggaaatacgccatgc
attgaatatgccaacatggacggctctaatcgcaaaataattgcagatacacacctcttc
tggcccaatggacttaccattgactacgccagtcaccgtatgtactgggtggatgctaaa
caccacatcattgaaagagctgacctggatgggaagaacagaaaggctgtcatcagccaa
ggtcttccacatccttttgccatcaccgtgtttgaagacagtctgtactggaccgactgg
cacaccaagagtatcaacagtgcaaacaagtttactggcaagaaccaagaggtcatccga
aacaagctgcactttcccatggacatccacaccctgcacccacagagacaacctgcaggt
gggagaaaccgctgtgggagcaataatggaggctgcagtcacctgtgtcttccaagcaat
aagacctacacctgtgcatgtcccacaggctttaaaaaggtggaccactataactgtggc
ctgagtcttgacaagttcctgctttttgcccgaaggacggacatccgtcgaatcagcttt
gacactgaagacaagctggacgacgtcattccactgactgatattcgaaacgcagtggcc
ctggactgggactctagtgagcgttacatatactggactgacgtcaccactgattccatc
aacagagcaaaatgggatggaagcaaacaggaggttgtggtggacaccagtttggaaagc
cctgcaggtttggctatcgattggcttacacataaactgtactggactgacgcaggaacg
gatcggattgaagtttcaaacacggatggaagcatgcgcacagttctgatctgggagaac
ctggaccgcccccgggacattgtcgtcgacccgatcggaggattcatgtactggacagat
tggggtgcaaatccaaagattgagcgcgcaggaatggatgcatccaaccgtatggttatt
gtctcaacaaacctgacctggcctaatggattggcaatcgactacagcactgagcgactg
tattgggccgatgctagcattaagaccattgagtatggcaacttcgatggatcaggcaga
caggtgttgattggcagtcagttgcctcatccgtttgggttgacgctccatgaagacaga
atttactggaccgactggcaatccaagagcatccaaagtgcagacaagctcactggtttg
gaccgaagaacgctggcagaaaaccttgaaaacctcatggacattcacatgttccaccat
cacagaactacagtccagacgccctgttcggtgaataatggtggctgcagtcacctctgc
ctcctggctcccgctcccaaaggctcgagctgtgggtgtcccactggtatcaaccttcag
gcagatggcaagacttgcactcacgcaatgaacagcttcctggtctttgcccggcggacg
gacgtcagaatgatatctttggacatcccgtattttgctgatgtggttctgccagtcact
gtgtctatgaagaacaccattgccattggagtggatgcagtagaaggtaaagtgtactgg
tcagacagtacattaaagaaaatcagcagagccaatatcaatggttcagaatatgaggac
attatttcaactggtctgatgaccacagatggtctagcagtggattcagtgggcagaaaa
atctactggacggacacggggacgaaccgcatcgaggtggctaatctcaacggctccatg
agaaaagtgcttgtgtggcagaacctggacagccctcgtgccattgccctgtttcatgag
atggggtacatgtactggacagactggggtgagcatgccaagctggagcgctctaatatg
gatggttcagatcgtgtggttctgataaataacaatctgggctggcctaatggactggcc
gtagacaaagctggatcacagctgctatgggccgatgctcatactgagcgcatagaagca
tctgatctgaatggttcaaaccggaggaccctggtgtcccccgtccagcacccgtacggt
ctcactctgctggggccgcacatgtactggacagactggcagagccgcagtattcataga
gcggacaaggacactggagcaaacaccatcaccgtccgctccaacttacccggcctcatg
gacatccaggctgttgaccgggcaagagctttgggcttcaataaatgtggcaggagaaat
ggtggctgctctcacctgtgtctgcctcgacataatgtgacgtcttgtgcgtgtcccact
ggtattctgctgagaagtgatggaagatcatgtgacaatttgcctgaaacgttcctgctc
ttttcaaatcgtgtcagtgttcggagaatctctctagacactaatgaccacacagacgtg
tacgtgcccgtgcccgagctgcataatgtgatttccttggactatgacagcgtggagagg
aaactctactacacggatgtgtctctggacgttataagacgggtggatttagatggcagc
aatatggaaactgtgatcagtcagggtctgaagacgactgatggacttgctgttgactgg
gtggcacgtaacatgtactggacagacactggtcgtaacactattgaagtggctcactta
gatgggacgtctcggaaagttctggtcaataacagtctggacgaaccaagagccatcgca
gtgtttcctagcaaggggttcttgttctggacggattggggtcatattgcaaagattgag
cgcgcatacctagatggcacagacaggaaagttctcatcaacacagatctgggatggcca
aacggcttgacactggactatgacactcgaaggatcttttgggtggatgcacacttggac
cgcatagaaagttctgacttgaatggcaaactgcgtcaaattctcatcagccctgtatca
cacccgtttgccctcacgcagttgaaaccggtatactctcctttaactcctttttcccga
atctcacagcaagaccgttggatttactggacggactggcagaccaagtctattcaacga
gtagataagcatacaggtcgtagtaaggaaactgtgctggctaatttagagggactcatg
gacatcatagtggtgtcgccacaaagacagactggaacgaatcattgcggtgtgaataac
gggggctgcacacacttgtgtcttgcgcggagtaatagttttgtgtgcgcttgtccagat
gagcctgacggcagaccctgctctacaatctctggttacattcccacggcacccgagaag
gactccaaaggtactcaagcccccaaaaaacaccccacacagaaacctcgtcagggcctg
tcagggggcaactgtacagacgcaagcctcaatctggaggactgcatccagaacagtgtg
gtgtctgcacctcgggacgagagccctcatatcagctacgtgattggtggagctctgtca
atactggccatcctgatactcatcgctgcgttccttatttacaggcataaaaaattcaag
tttgccgaaccaggagtgagcaacttgacttacagcaacccttcatacaggacatcaaca
caggaggttaaaatagagactgcacagaaacctgcaataaacaaccagctgcggtataaa
aaagaggtccagggcgtttgtgatgcaggctacactaaagagaagatccgcatcgtggaa
ggtgtgtgtctgctctcaggagaggatctttactgggaagacttgagacagctgaaggtg
tgtcgaggagccgggcttcaagcctgcatgcgtacagacacggtctctctacaggccagc
tccgcctctctgaacgacggagagaccgagcagctgctgcagggcgaccaatcagagtgc
tcgagtctaagcaccgcccacgccgtgacggctccgcatcacagcacacatcccgacacc
ggctgggtccccaaccgtaaaacctcgactgagagcgaagtgtga
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integrated database retrieval system
