Carassius gibelio (silver crucian carp): 128016462
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Entry
128016462 CDS
T08819
Name
(RefSeq) protein transport protein Sec24D-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128016462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128016462
Membrane trafficking [BR:
cgib04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128016462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
128016462
NCBI-ProteinID:
XP_052456937
LinkDB
All DBs
Position
A7:complement(4460407..4482609)
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AA seq
1034 aa
AA seq
DB search
MSQQGYVAAPPYSQAQAGMGGYSAGFGNPPPQSHYGAYGSPPQGYSAPPTGVLKPPASSS
SGMPPPPVSSQYGANIQQNGAHPHSFPPPVASAPSMSPYGQPPQSAFYSMAQAPPPTQQL
TNQMSGMNIGGYGQRPMQVPQSPSSSAAPQQYHTSPPPAMGHPPISPPGQQQPSFVSPPP
MAMMGSVTAPPMGMSGPPGPGVHQPPMGPQGYQQQPGSPISGPYGAQMAGQQMAGPQSGA
FPGGFPGGTAQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYVTNIRGQVPPLVTTDF
TVQDQGNASPRFMRCTTYSFPSTADLAKQCKVPLAAIIKPFATLPKNESPLYIVNHGETG
PIRCNRCKAYMCPYMQFMDGGRRYQCGFCSCVNEVPVQYFQHLDHMGRRMDLYERPELSL
GSYEFIATLDYCKNNKPPNPPAYIFMIDVSYNNIKSGLVKLICEELKTLLDLLPKEEGAE
TSPIRVGFVTYNKILHFYNVKSALAQPQMMVVSDVSEMFVPLLDGFLVNFQESRAVINNL
LDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEAPGKLKNRDDR
KLVGTEKEKTLFQPQRGVYEQLAKDCVAQGCCVDLFLFPNQYVDIATMGDVPSHTGGSIY
KYSNFQMEVNGQQFVSDLRRDVEKSIGFDAVMRIRTGTGFRATDFFGAIYMNNTTDVEMA
AVDCDKAVTVEFKHDDTLSEESGAVMQCALLYTTIGGQRRLRIHNLSLNCSSQLSELYKS
CETDALINFFAKSAYRAMLNQPLKTVREILVNQMAHMLACYRKSCASPSVASQLILPDAM
KVFPVYMNSLLKTPTLVSSAELSTDDRAFHRFLVNAMGVEETQVLLYPRLIPLHTMDVSS
DAIPAPVRCSEERLSESGIFLLENGLSMFLWLGQACPPDLIQNLFSVPSLGHLSSDGQMS
LPVLDNAHSRKIHSIISSISQQRATSMKLLIVKQKDRSEMLFRQHLVEDKGLHGGASYMD
FLCYVHREIRQLLT
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcaaggttatgttgccgcccctccatactcccaggcccaagctggaatgggg
ggatactctgctggttttgggaaccccccacctcagtcgcattatggcgcttatggatct
cctccacagggttactccgcccctccaacaggtgtgctcaagcctcctgcctcctcttct
tctgggatgcctccaccaccggtatccagccagtatggagctaacattcagcagaatggg
gcccatccccacagtttccctcctcctgttgcttcagctccttctatgtctccttatgga
cagcctcctcaaagtgctttttatagtatggcacaagccccgcctccaactcaacagctg
accaatcaaatgagtggcatgaacatcggaggatatggccaaaggcccatgcaggtacca
cagtctccttccagctcagcagcaccacaacaatatcacacatcacctccaccagcaatg
gggcatccgcccatttctccaccaggacagcagcagccatcatttgtatctcctccacca
atggccatgatgggttctgtgacagctccaccaatgggaatgtctggcccacctggacca
ggtgtccaccaaccaccaatgggaccccaaggctatcaacagcaaccagggagcccgatt
tcaggcccgtatggtgcacaaatggcaggtcaacagatggcagggccacagtcaggtgct
ttcccaggaggttttcctggaggtaccgcacaaatggcaggccctcctcaaaagaagctg
gacccagactctattccaagcacgacgcaagtgattgaggatgaccaggctaagagagga
ggccaggtgtacgtcacaaacatcagaggtcaggtgcctccactggtcaccacagatttc
acagtgcaggaccaagggaatgccagcccaaggttcatgcggtgcacaacatattccttc
cccagcactgctgaccttgcaaagcagtgcaaagtgcctctggcagccattattaaaccc
tttgccactctgcccaaaaatgagagtcctctgtacattgtaaatcacggtgagactgga
ccgatccgctgcaaccgctgtaaggcctacatgtgtccttacatgcagtttatggatgga
ggacgacgctaccagtgtggcttctgcagctgcgttaatgaagttccagtgcagtatttc
cagcatttggaccatatggggagaagaatggatctgtatgagagaccagaactgtctctg
ggctcatacgagttcattgccacattggattattgcaagaataataagcctccgaatcct
cctgcctacatcttcatgatcgatgtctcctacaacaacataaaaagtggacttgtgaaa
ctaatatgcgaggaactgaagacgctgcttgacctacttccaaaagaggagggagcagag
acttcacccatcagagtgggttttgtcacctataataagatcctgcacttctataacgtg
aagagcgctctggcccagccgcagatgatggtggtctctgatgtatctgagatgtttgta
ccacttctcgacggattcctcgtcaacttccaggagtcccgagctgtcatcaacaacctt
ttagatcagatccctgacatgtttgctgacaccaacgagagcgagacggttttcgctccg
gtcatccaagctggtgtggaggcactgaaggcagctgaatgcagtggcaaactcttcatc
tttcattcctccatcccaacagcagaggctccaggaaaactcaaaaacagagatgacaga
aaactagtgggtacagaaaaggagaagactctgttccagcctcagcggggtgtgtatgag
cagctggctaaagactgtgtggcacaaggctgttgtgtcgacctcttcctgtttcctaac
cagtatgtggatatagccaccatgggagatgtgccgtcacacaccggcggctccatctac
aagtacagcaacttccagatggaggtgaatggtcaacagtttgtcagtgacctcaggaga
gatgtggagaagtccatcggcttcgacgccgtcatgcgcatccgtactggaacaggcttc
agggcgacagacttctttggcgcgatatacatgaacaacactacagatgtggaaatggca
gcggtggactgtgacaaggccgtgacggtcgagtttaaacacgacgacacactcagcgag
gagtctggagctgtgatgcagtgtgcactgctctacaccaccatcggaggacagaggagg
ctgcggattcacaacctcagtctgaactgcagctctcagctttctgaactctacaagagc
tgcgagacagacgccctcatcaacttcttcgccaagtcagcgtatcgggccatgctcaac
cagccactgaagactgtgagagagatcctggtgaaccagatggctcacatgctggcctgc
tacaggaagagctgcgccagtccttcagtagccagccagctaatcctgcctgatgcgatg
aaggtgtttcccgtctacatgaacagtctgttgaagactccgactctagtgagcagtgct
gagctctccacagatgaccgggccttccacagattcctggtcaatgcgatgggagtggag
gaaacacaggtcctgctgtatccacgcctcatcccgctgcacactatggatgtgtccagc
gatgcgatcccggctccagtgcgctgctctgaggagcggctcagcgagtccggcatcttc
ctgctggaaaacgggctctccatgttcctctggctgggacaggcctgtccacccgacctc
atccagaacctcttcagtgtgccctctctcggccacctgtcctcagacgggcagatgtca
ttacctgtgctggataatgctcattccaggaagatccattcaatcatctccagcatttca
cagcagagagccacatccatgaagctgctgatagtgaagcagaaagaccgatcggagatg
ttgttccgtcagcacctggtggaggacaagggtctacacggaggagcgtcttacatggac
ttcctgtgctacgtccaccgcgagatcaggcagctgcttacttaa
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integrated database retrieval system
