Carassius gibelio (silver crucian carp): 128017162
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Entry
128017162 CDS
T08819
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128017162
Spliceosome [BR:
cgib03041
]
Complex A
Other components
Complex A specific factors
128017162
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GFIT
Motif
Pfam:
SF1-HH
KH_1
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
128017162
NCBI-ProteinID:
XP_052458362
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Position
A7:complement(30348282..30357930)
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AA seq
663 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFESGPGAGLMAPPGPAVSFPLQNLQQPQLSNPGFSQFP
GAVSSALSNPVGVGLPSMAGNTDFGQKKRKRSRWSSETPDQKTIIPGMPTVIPAGLTRDQ
ERAYIVQLQIEDLTRKLRTGDLGIPVIPEDRSPSPEPIYNSEGKRLNTREYRTRKKIEEE
RHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIE
KECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQ
GIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAGHI
SSDCKFTSSFAQRPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNPPPSGPRP
SGPNNNQPPPNRPPWMNSGPTDNRNYHGMHQVPGGPHNFPPPMPNMGGHPMPPNPNGMPP
PWMQPPPPPMSQGPAPPGHPMGLLPPPMGMMPPPPPPPNNQPPPPPSGPLPPWQQQAPPP
PPTSSMATSAPLPWQQNTTTTSTPATGNLPPWQQPQQTAASAAQPPPPMGNPSMVPPPPG
VQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPNFVTMMGIPGMPPYGMPPAPPPPP
PQS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctgcacccgagtatcggcgctaag
cgaggctttgaatcgggccccggcgcggggttaatggctccgcccgggcctgcggtgtct
ttcccgctgcagaacttacagcaaccgcagctatcaaacccaggcttctcccagttcccc
ggagccgtgagttctgcgctctcaaacccggtcggagtggggctaccgtctatggcgggg
aatacagattttggccagaagaagcgaaaaaggagtcgctggagcagcgaaacccctgat
cagaagaccattatcccgggcatgcccaccgtgatccctgctgggctgactcgggaccag
gaacgagcttatatagtccaactgcagatcgaagacctgacacgtaaactgcgtacagga
gacctgggaatccctgttatccctgaggacaggtctccatctcctgagcccatctacaac
agtgaggggaagaggcttaacacgcgtgaatatcggacacgcaagaaaatagaggaagag
agacattctcttattacagagatggtgggactgaacccagaattcaaaccccctgctgac
tacaaaccaccagctactcgggtcagtgataaggtgatgattcctcaggatgaatatcct
gagatcaactttgttgggcttttgattggcccacgtggcaacactctgaaaaacattgag
aaggagtgctgtgctaagatcatgattcgcggcaaaggctcagtaaaggaaggaaaggtt
ggccgtaaggatggacagatgcttccaggagaagatgaacctcttcatgcactggtcact
gctaacaccatggagaatgtcaagaaagctgtagagcagattcgtaatatcctcaagcag
ggcattgagacccctgaagaccagaacgatctgagaaagatgcagctgagggagctggca
cgactcaatggcactctgagagaggatgataacagaattttacgcccatggcagagcaca
gagcctcgcagcatcacaaacacaactgtctgtacaaagtgtggtggagcaggtcacatc
tcatccgactgcaagtttaccagttcctttgcacaacgacccggtgaaccaccccagtct
gctcaggataaggctagaatggataaagagtacttgtctctcatggcagagctaggagag
gctccagtcccttcctctggtgggggccacagcaatcctccccctagtggacctcgtcct
tcaggacccaacaacaaccagccgccaccaaatcgtcctccttggatgaattcaggccct
actgataacaggaattaccatggcatgcaccaggttcctggtggccctcacaacttccct
ccaccaatgccaaacatgggtggccatcctatgccaccaaaccccaatggaatgcctcca
ccctggatgcagccaccacctcctccaatgagccaaggcccagcaccacccggacacccc
atgggtttattgccaccacccatgggtatgatgcccccacctccacctccccccaacaac
caaccaccacctcccccctcaggacctctgccaccgtggcaacagcaggcacctccccca
ccacccaccagcagcatggcaaccagcgctccactgccatggcaacaaaatacaaccacc
acatccacccctgcaactggaaacctgccaccctggcaacagcctcagcagacggccgcc
tcagccgctcagccacctccacccatgggcaacccctctatggtgccgcctccacctggg
gtccagcccccactgcctcctggtgcgccccctcctccaccaccccctcctcctggctcg
gcaggcatgatgtatgcacctcctccccctcccccaccaatggaccctaactttgtgacc
atgatggggattcccggtatgccaccttacgggatgccccctgcgcctccaccccctccg
ccccagagttaa
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