Carassius gibelio (silver crucian carp): 128019601
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Entry
128019601 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128019601
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128019601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
128019601
NCBI-ProteinID:
XP_052461639
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Position
A9:8342465..8381727
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AA seq
555 aa
AA seq
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MAETSFSQDQFSCPVCLDLLKNPVTIPCGHSFCMSCITECWDQEDLMGVYSCPQCRQTFT
PRPALNKNTMLAEVVEQLTKTKLQASVPAGPEDVECDVCTVRKHKAIKSCLVCLNSYCQN
HLQQHENLFKGKRHNLTEAIGRLQEMICPKHNKQLEIYCHTDQQCICYLCTMDNHKNHDT
VAAVAERTKKQVVLEERKRKFQQRIQQREKDLEELREAVESHKRSAQTAVEDSERIFTEL
ILSIERSRSELKQRIREREKAAVSRAEGLIYRLEQEIDDLTRRGAELEQISQTDDHIHFL
QTFQSLAISPESTDIPDVTVSSLLSFDDVRKSISQLKEKLEDFCRDEIDKISGKATYIEI
IPTNEPKIRKEFLQYSSGFTLDPNTVNKHLRLSERNRAVTFTDGVQQYPDHPDRFDSLLH
VLCRESVCGRCYWETEWSGSLGVGISVSYKNISRKGRGNECLFGYNDQSWRLSCSPSSYS
FWNNGSCSDFPELFSCRRIGVYVDHRAGTMSFYSVSDTMSLIHRFKTTFTQPLYPGFAVH
RGSAVKLCDLTSVGE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccagtttttcccaggaccagttcagctgtccggtgtgtctggatctcctg
aagaatccagtgaccattccctgtggacacagtttctgtatgagctgtattacagagtgc
tgggatcaggaggatctgatgggcgtctacagctgtcctcaatgcaggcagaccttcact
ccaagacctgctttaaataaaaacactatgctggctgaagtggtggagcaactgactaag
actaaacttcaggcttctgttcctgctggacctgaagatgtggagtgtgacgtctgtact
gtgagaaaacacaaagccatcaagtcctgtctggtgtgcctgaactcttactgtcaaaat
cacctccaacaacatgagaatctctttaaaggtaagagacacaatctgacagaagccatt
ggacgacttcaggagatgatatgcccgaaacataataaacaactggagatctactgtcat
actgaccagcagtgcatttgttatctgtgcacgatggataatcacaaaaaccatgatact
gtagcagctgtagcagagaggacaaagaaacaggtggttttggaagagagaaagagaaaa
ttccagcagagaatccagcagagggagaaagatcttgaggagctgagagaggctgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgagctc
atcctctccattgagagaagccgctctgagttgaaacagcggatcagagaacgggaaaag
gctgcagtgagtcgagctgaaggactcatatatcgactggagcaggagattgatgatctg
acgaggagaggcgctgaactggagcagatttcacaaacagatgatcacatacatttcctc
cagaccttccaatctcttgctatatcccctgaatctacagatattcctgatgtcactgta
agctctctcctctcttttgatgatgtaagaaagtctatctctcaactgaaagaaaaacta
gaggatttctgtagagatgaaattgacaagatttctggcaaagcaacatacattgaaatt
atccccaccaatgaaccaaagatcagaaaggagtttctacaatattccagtgggttcact
ctggatccaaacacagtgaataaacacctccgtctgtctgagaggaacagagcagttacc
ttcactgacggagtccagcagtatcctgatcatccagacagatttgatagtttgttgcat
gtgttgtgtagagagagtgtgtgtggacgctgttactgggagactgagtggagcgggagt
cttggtgtgggtatatcagtgtcatataaaaacataagtaggaagggacggggaaatgag
tgtttatttggatataatgatcaatcctggagactgtcttgttctccttctagttactca
ttctggaacaatggcagttgttctgatttccctgaactcttcagctgcaggagaatagga
gtgtatgtggatcacagagcagggactatgtccttctacagcgtctctgacacaatgagc
ctcatccacagattcaagaccacatttactcagcctctctatcctgggtttgcagttcat
cgtggatcagcagtgaaattgtgtgacctaaccagtgttggggagtaa
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