Carassius gibelio (silver crucian carp): 128019602
Help
Entry
128019602 CDS
T08819
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128019602
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128019602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
PRP9_N
SPX
Motif
Other DBs
NCBI-GeneID:
128019602
NCBI-ProteinID:
XP_052461641
LinkDB
All DBs
Position
A9:8384353..8402447
Genome browser
AA seq
552 aa
AA seq
DB search
MAETSFSQNQFSCPVCLDLLKDPVTIPCGHSFCMRCITECWDQEDLMGVYSCPQCRQTST
PRPTLNKNTMLAEVVEQLKKSKLQASVPAGPEDVECDVCTVRKHKAIKSCLVCLNSYCQN
HLQQHENLFKGKRHNLTEAIGRLQEKTCPTHNKLLEIYCHTDQQCICYLCTMDNHKNHNT
IAAVAERTKKQIILKETQRKFLQRIQQRKKDLEELREAVESHKCSAERAVEDSERIFIEL
IHTIEKIRSKMLQMIREQEKAAVSRAEGLIYQLKQEIDNLKKKQAELKQISQTNDHIHFL
KSFQSLAVSPESADEPNITVSSLLSFDEVRKSVSQLKEKLEDFCREEIENISGRVTYVEI
IPTNEPEIREEFLQYYSKFTLDPNTVNEHLRLSVWSGVFNVPNVVQQYPDHPDRFDPYPQ
VLCRESVCGRCYWELEWSGDDGVDISVSYKSVSRKGGRNECVFGCNDQSWCLDCTALLYS
FWHNNSYTDLPVPYGRRRIGVYVDHRAGTLSFYSVSDTMSLIHRVKTTFTQPLYPGFAVH
CGSAVKLCDLTI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactagtttttcccagaaccagttcagctgtccggtgtgtctggatctcctg
aaggacccagtgaccattccctgtggacacagtttctgtatgagatgtattacagagtgc
tgggatcaagaggatctgatgggcgtctacagctgtcctcaatgcagacagacctccact
ccaagacctactttaaataaaaacactatgctggctgaagtggtggagcaactgaagaag
tctaaacttcaggcttctgttcctgctggacccgaagatgtggagtgtgacgtctgtact
gtgagaaaacacaaagccatcaagtcctgtctggtgtgcctgaactcttactgtcaaaat
cacctccaacaacatgagaatctctttaaaggtaagagacacaatctgacagaagccatt
ggacgacttcaggagaaaacctgtccaacacataataaattactggagatctactgtcat
actgaccagcagtgcatttgttatctgtgcacgatggataatcacaaaaaccacaacact
atagcagcagtagcagagaggacaaagaaacagataattttgaaagagacacagagaaag
ttcctgcagagaatccagcaaagaaagaaagatcttgaggagctgagagaggctgtagag
tctcataagtgctctgcagagagagccgtggaggacagtgagaggatcttcattgagctc
atccataccattgagaaaatccgttctaagatgctgcagatgatcagagaacaggaaaag
gctgcagtgagtcgagctgaaggactcatatatcaactgaagcaagagattgataatcta
aaaaagaaacaagctgaactaaagcagatttctcaaacaaatgatcacatccactttctc
aagagtttccagtctctcgctgtatctcctgaatctgcagatgaacccaacatcactgtc
agctctctcctctcttttgatgaagtgagaaagtctgtctctcaactcaaagaaaaacta
gaggatttctgtcgagaggaaatagaaaatatatctggcagagtaacatatgttgaaatt
attcccaccaatgaacccgagatcagagaggagttcctacaatattacagtaagttcact
ctggatccaaacacagtgaatgaacacctccgtctgtcagtctggagtggagtgtttaat
gtccctaatgtagtccagcagtatcctgatcatccggacagatttgacccttatcctcag
gtgttgtgtagagagagtgtgtgtggacgctgttactgggagctggagtggagcggtgat
gatggtgtggatatatcagtgtcatacaagagcgtcagcaggaagggaggcagaaacgag
tgtgtgtttggatgtaacgaccagtcgtggtgtttggactgcactgccttgctttactcg
ttctggcacaataacagctacactgatcttcctgtaccgtacggtcgcaggagaatagga
gtgtatgtggatcacagagcaggaactctgtccttctacagcgtctctgacacaatgagc
ctcatccacagagtcaagaccacatttactcagcctctctatcccgggtttgcagttcat
tgtggatcagcagtgaaactgtgtgacctaacgatatag
DBGET
integrated database retrieval system
